Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01784 ATGTACTCATCATTCTTCACCCCGATAGAGTTTGGATTTTTTCGTGGCCTGCCAGAGAATCTCTTTATACTTGACATTGTAGGACAGCTTGCTTTTCTTGTGGACATTGTTTTGCGGTTCTTTGTTGCTTATAGAGACAGCCAGACCTATCGCATGGTCTACAGGCGTGCTCCTATCGCTACGCGGTATCTAAAATCTAGTTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTTATCTACAAGGCTTGTGGATCGAGAGAGGAAGTGAGGTTCCTATTGTGGATCAGATTATATAGGGCGCAGATAGTCGTGCGATTTTTCATGAATTTGGAAAAAGACATACGTTTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTATTGCACACACACAGCAGCCTGCGTTTTCTACTATTTGGCTACTACACTACCTGAATCACAAGAGGGTTACACATGGATAGGAAGTTTGAAAATGGGTGACTATAGTTATTCAAATTTCAGAGAAATTGATTTTTGGAAGCTCTACACAACATCATTGTATTCTGCTATTGTTACGATGACTACTGTTGGCTATGGTGATATACATGCTGTAAATATGAGGGAGATGGTATTTGTAATGGTTTATGTTTCATTCGACATGGTTCTTGGTGCATATTTGATCGGTAACATGACAGCTTTAATAGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATTTGATGAAATATATGAATAGAAATAAACTTGGCAGGGATATCCGTGAACAAATAAAGGGTCACGTGCGCTTGCAGTTTGAGAGCAGTTACACCGACGCTGCTGTCCTTCACGACATTCCTATTTCTATTCGATCTAAGATATCCCAATCGTTGTACTTGCCATACATTGAAAACATTCCCCTTTTTAGAGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAAGAATTCTTTCTTCCAGGAGAAGTTATAATGCAACAAGGAAACGTTGTAGATCAACTATATTTTGTCTGCGATGGTGTGCTGGAGGTAGTAGGCACAGCTGAAGATGGGACCGAAGAAACTCTTTCACTTTTAGAGCACAACAGTTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCATTTACTGTCCGTGTTTGTGAACTGTGTAGGGTCTTGCGACTTGATAAACAATCATTTTCAAATATCCTAGATATATACTTTTATGATGGAAAGAAAGTATTAGACAACCTTGTAGAGGGAAAAGAATCTATTAGAGGTAAGCAATTGGAGTCAGACATCACATTTCATATTGGAAGGCTAGAATCTGAACTTGCTTTGAAGGTCAATAGAGCAGCTTTTGATGGTGATATGTATCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCTAAGAAGACAGATTATGATGGAAGATCACCTTTGCATCTTGCGGCCTGCAGAGGATATGAAGATATCACACTTCTCCTTATTCATGAAGGCGTCGACATCAACATCAAAGATAACTTCGGGAACACACCACTACTTGAAGCAGTTAAGAATGGACACGATCGGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCTATGAAGATAGATGATAGTGGTAGTTTTTTATGCACAGCAGTTGCAAGAGGAGATCCAGATTATGTTAAAAGACTTCTATCTAATGGAATGGATCCTAATTTGAAAGATTACGACAATCGAACCCCTCTACATGTTGCTGCATCTGCAGGTTTAATCTTCATGGTAAAGTTGCTATTAGAAGCTGGAGCCAGTGTTTTTACAAAAGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGGATGAGTGGAAATAAGAATCTGATAAAGATGCTGGAAGTTGCAAAATCTGCTCAGTTGACAGAATACCCTTTTCCCCAAGAAATTATAGATAAAGTACATCCAAAGAAGTGCACAGTGTTCCCTTTCCACCCATGGGGTCCAAAAGACTCTAGAAGAAATGGAATAGTATTATGGGTTCCACACACCATTGAAGAGCTAGTCAAAACAGCAGCAGAACAGATAGGATTTTCTAGGGACTCTTGTATTTTATCAGAAGATGCTGGTAAAGTTATTGATGTGAGCATGATTAAGGATGATCAGAAATTGTATTTAGTCCGCGAAGCACATTAG 2205 0.3932 MYSSFFTPIEFGFFRGLPENLFILDIVGQLAFLVDIVLRFFVAYRDSQTYRMVYRRAPIATRYLKSSFVIDLLGCMPWDLIYKACGSREEVRFLLWIRLYRAQIVVRFFMNLEKDIRFNYIIARIVKLLVVELYCTHTAACVFYYLATTLPESQEGYTWIGSLKMGDYSYSNFREIDFWKLYTTSLYSAIVTMTTVGYGDIHAVNMREMVFVMVYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLGRDIREQIKGHVRLQFESSYTDAAVLHDIPISIRSKISQSLYLPYIENIPLFRGCSSEFINQIVTRLHEEFFLPGEVIMQQGNVVDQLYFVCDGVLEVVGTAEDGTEETLSLLEHNSSFGEISILCNIPQPFTVRVCELCRVLRLDKQSFSNILDIYFYDGKKVLDNLVEGKESIRGKQLESDITFHIGRLESELALKVNRAAFDGDMYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINIKDNFGNTPLLEAVKNGHDRIASLLVREGASMKIDDSGSFLCTAVARGDPDYVKRLLSNGMDPNLKDYDNRTPLHVAASAGLIFMVKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKMLEVAKSAQLTEYPFPQEIIDKVHPKKCTVFPFHPWGPKDSRRNGIVLWVPHTIEELVKTAAEQIGFSRDSCILSEDAGKVIDVSMIKDDQKLYLVREAH 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01784 734 ProSiteProfiles cAMP/cGMP binding motif profile. 310 413 IPR000595 -
Vivi7g01784 734 PANTHER POTASSIUM CHANNEL AKT1 1 731 IPR045319 GO:0005249|GO:0006813
Vivi7g01784 734 CDD CAP_ED 310 416 IPR000595 -
Vivi7g01784 734 Pfam Cyclic nucleotide-binding domain 330 414 IPR000595 -
Vivi7g01784 734 FunFam Potassium channel SKOR 1 235 - -
Vivi7g01784 734 PRINTS Ankyrin repeat signature 599 613 IPR002110 GO:0005515
Vivi7g01784 734 PRINTS Ankyrin repeat signature 487 502 IPR002110 GO:0005515
Vivi7g01784 734 SMART ANK_2a 486 515 IPR002110 GO:0005515
Vivi7g01784 734 SMART ANK_2a 616 646 IPR002110 GO:0005515
Vivi7g01784 734 SMART ANK_2a 550 579 IPR002110 GO:0005515
Vivi7g01784 734 SMART ANK_2a 583 612 IPR002110 GO:0005515
Vivi7g01784 734 SMART ANK_2a 519 548 IPR002110 GO:0005515
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat profile. 486 518 IPR002110 GO:0005515
Vivi7g01784 734 SUPERFAMILY Ankyrin repeat 460 636 IPR036770 -
Vivi7g01784 734 Gene3D Jelly Rolls 294 431 IPR014710 -
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat profile. 519 551 IPR002110 GO:0005515
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat region circular profile. 583 615 - -
Vivi7g01784 734 Pfam Ankyrin repeats (3 copies) 556 636 IPR002110 GO:0005515
Vivi7g01784 734 Pfam Ankyrin repeats (3 copies) 461 549 IPR002110 GO:0005515
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat region circular profile. 519 550 - -
Vivi7g01784 734 SUPERFAMILY Voltage-gated potassium channels 2 235 - -
Vivi7g01784 734 FunFam Potassium channel KAT2 298 435 - -
Vivi7g01784 734 Gene3D - 449 551 IPR036770 -
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Vivi7g01784 734 Gene3D - 2 236 - -
Vivi7g01784 734 Gene3D Helix hairpin bin 237 293 - -
Vivi7g01784 734 Pfam KHA, dimerisation domain of potassium ion channel 660 729 IPR021789 -
Vivi7g01784 734 SMART cnmp_10 310 428 IPR000595 -
Vivi7g01784 734 Gene3D - 552 646 IPR036770 -
Vivi7g01784 734 Pfam Ion transport protein 1 235 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi7g01784 734 PRINTS EAG/ELK/ERG potassium channel family signature 226 235 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01784 734 PRINTS EAG/ELK/ERG potassium channel family signature 134 144 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01784 734 PRINTS EAG/ELK/ERG potassium channel family signature 25 35 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01784 734 PRINTS EAG/ELK/ERG potassium channel family signature 182 199 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01784 734 ProSiteProfiles KHA domain profile. 661 734 IPR021789 -
Vivi7g01784 734 SUPERFAMILY cAMP-binding domain-like 238 427 IPR018490 -
Vivi7g01784 734 ProSiteProfiles Ankyrin repeat region circular profile. 486 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01784 Vivi-Chr7 76720243 76729643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01784 557 636 Ion Channels AT5G37500 32.353 5.57e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01784 K21867 - gmx:100814385 1264.21