Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01782 ATGAAAATCGATAAGAAGGAGACGAAGGAAGTGGATGAAGAAGAGAAAAACAAACACAAGCAAACGGCGACAAGTTCAAAATCCTCCTCTTCTTCTTCTTCGCGTTCATCTTTTTCATATGAAAGAGAATACGAAATTCAAGATATTCATGATGGAATAAAATCATCAAGAGTAAGCAGATTCAATCTTCTAGAGAAAGAGTTAGGGTTGAAGATTGGATGGAGAAAGTTTAGTCGCCAAGCTCTTTTTCATGAGTTCGTTATCGATCCTGATAACAGGTGGTATCGGGCATGGATCAAGTTCATATTATTATGGGCAATGTACTCATCATTCTTCACCCCGATAGAGTTTGGATTTTTTCGTGGCCTGCCAGAGAATCTCTTTATACTTGACATTGTAGGACAGCTTGCTTTTCTTGTGGACATTGTTTTGCGGTTCTTTGTTGCTTATAGAGACAGCCAGACCTATCGCATGGTCTACAGGCGTGCTCCTATCGCTACGCGGTATCTAAAATCTAGTTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTTATCTACAAGGCTTGTGGATCGAGAGAGGAAGTGAGGTTCCTATTGTGGATCAGATTATATAGGGCGCAGATAGTCGTGCGATTTTTCATGAATTTGGAAAAAGACATACGTTTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTATTGCACACACACAGCAGCCTGCGTTTTCTACTATTTGGCTACTACACTACCTGAATCACAAGAGGGTTACACATGGATAGGAAGTTTGAAAATGGGTGACTATAGTTATTCAAATTTCAGAGAAATTGATTTTTGGAAGCTCTACACAACATCATTGTATTCTGCTATTGTTACGATGACTACTGTTGGCTATGGTGATATACATGCTGTAAATATGAGGGAGATGGTATTTGTAATGGTTTATGTTTCATTCGACATGGTTCTTGGTGCATATTTGATCGGTAACATGACAGCTTTAATAGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATTTGATGAAATATATGAATAGAAATAAACTTGGCAGGGATATCCGTGAACAAATAAAGGGTCACGTGCGCTTGCAGTTTGAGAGCAGTTACACCGACGCTGCTGTCCTTCACGACATTCCTATTTCTATTCGATCTAAGATATCCCAATCGTTGTACTTGCCATACATTGAAAACATTCCCCTTTTTAGAGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAAGAATTCTTTCTTCCAGGAGAAGTTATAATGCAACAAGGAAACGTTGTAGATCAACTATATTTTGTCTGCGATGGTGTGCTGGAGGTAGTAGGCACAGCTGAAGATGGGACCGAAGAAACTCTTTCACTTTTAGAGCACAACAGTTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCATTTACTGTCCGTGTTTGTGAACTGTGTAGGGTCTTGCGACTTGATAAACAATCATTTTCAAATATCCTAGATATATACTTTTATGATGGAAAGAAAGTATTAGACAACCTTGTAGAGGGAAAAGAATCTATTAGAGGTAAGCAATTGGAGTCAGACATCACATTTCATATTGGAAGGCTAGAATCTGAACTTGCTTTGAAGGTCAATAGAGCAGCTTTTGATGGTGATATGTATCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCTAAGAAGACAGATTATGATGGAAGATCACCTTTGCATCTTGCGGCCTGCAGAGGATATGAAGATATCACACTTCTCCTTATTCATGAAGGCGTCGACATCAACATCAAAGATAACTTCGGGAACACACCACTACTTGAAGCAGTTAAGAATGGACACGATCGGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCTATGAAGATAGATGATAGTGGTAGTTTTTTATGCACAGCAGTTGCAAGAGGAGATCCAGATTATGTTAAAAGACTTCTATCTAATGGAATGGATCCTAATTTGAAAGATTACGACAATCGAACCCCTCTACATGTTGCTGCATCTGCAGGTTTAATCTTCATGGTAAAGTTGCTATTAGAAGCTGGAGCCAGTGTTTTTACAAAAGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGGATGAGTGGAAATAAGAATCTGATAAAGATGCTGGAAGTTGCAAAATCTGCTCAGTTGACAGAATACCCTTTTCCCCAAGAAATTATAGATAAAGTACATCCAAAGAAGTGCACAGTGTTCCCTTTCCACCCATGGGGTCCAAAAGACTCTAGAAGAAATGGAATAGTATTATGGGTTCCACACACCATTGAAGAGCTAGTCAAAACAGCAGCAGAACAGATAGGATTTTCTAGGGACTCTTGTATTTTATCAGAAGATGCTGGTAAAGTTATTGATGTGAGCATGATTAAGGATGATCAGAAATTGTATTTAGTCCGCGAAGCACATTAG 2523 0.3908 MKIDKKETKEVDEEEKNKHKQTATSSKSSSSSSSRSSFSYEREYEIQDIHDGIKSSRVSRFNLLEKELGLKIGWRKFSRQALFHEFVIDPDNRWYRAWIKFILLWAMYSSFFTPIEFGFFRGLPENLFILDIVGQLAFLVDIVLRFFVAYRDSQTYRMVYRRAPIATRYLKSSFVIDLLGCMPWDLIYKACGSREEVRFLLWIRLYRAQIVVRFFMNLEKDIRFNYIIARIVKLLVVELYCTHTAACVFYYLATTLPESQEGYTWIGSLKMGDYSYSNFREIDFWKLYTTSLYSAIVTMTTVGYGDIHAVNMREMVFVMVYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLGRDIREQIKGHVRLQFESSYTDAAVLHDIPISIRSKISQSLYLPYIENIPLFRGCSSEFINQIVTRLHEEFFLPGEVIMQQGNVVDQLYFVCDGVLEVVGTAEDGTEETLSLLEHNSSFGEISILCNIPQPFTVRVCELCRVLRLDKQSFSNILDIYFYDGKKVLDNLVEGKESIRGKQLESDITFHIGRLESELALKVNRAAFDGDMYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINIKDNFGNTPLLEAVKNGHDRIASLLVREGASMKIDDSGSFLCTAVARGDPDYVKRLLSNGMDPNLKDYDNRTPLHVAASAGLIFMVKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKMLEVAKSAQLTEYPFPQEIIDKVHPKKCTVFPFHPWGPKDSRRNGIVLWVPHTIEELVKTAAEQIGFSRDSCILSEDAGKVIDVSMIKDDQKLYLVREAH 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat profile. 625 657 IPR002110 GO:0005515
Vivi7g01782 840 Gene3D - 555 657 IPR036770 -
Vivi7g01782 840 SUPERFAMILY cAMP-binding domain-like 344 533 IPR018490 -
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat profile. 592 624 IPR002110 GO:0005515
Vivi7g01782 840 Pfam Ion transport protein 96 341 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi7g01782 840 PRINTS EAG/ELK/ERG potassium channel family signature 131 141 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01782 840 PRINTS EAG/ELK/ERG potassium channel family signature 332 341 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01782 840 PRINTS EAG/ELK/ERG potassium channel family signature 240 250 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01782 840 PRINTS EAG/ELK/ERG potassium channel family signature 288 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g01782 840 Gene3D Helix hairpin bin 343 399 - -
Vivi7g01782 840 PRINTS Ankyrin repeat signature 705 719 IPR002110 GO:0005515
Vivi7g01782 840 PRINTS Ankyrin repeat signature 593 608 IPR002110 GO:0005515
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat region circular profile. 689 721 - -
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Vivi7g01782 840 FunFam Potassium channel SKOR 96 341 - -
Vivi7g01782 840 SUPERFAMILY Ankyrin repeat 566 742 IPR036770 -
Vivi7g01782 840 CDD CAP_ED 416 522 IPR000595 -
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat region circular profile. 625 656 - -
Vivi7g01782 840 SMART ANK_2a 656 685 IPR002110 GO:0005515
Vivi7g01782 840 SMART ANK_2a 689 718 IPR002110 GO:0005515
Vivi7g01782 840 SMART ANK_2a 625 654 IPR002110 GO:0005515
Vivi7g01782 840 SMART ANK_2a 722 752 IPR002110 GO:0005515
Vivi7g01782 840 SMART ANK_2a 592 621 IPR002110 GO:0005515
Vivi7g01782 840 MobiDBLite consensus disorder prediction 1 37 - -
Vivi7g01782 840 SMART cnmp_10 416 534 IPR000595 -
Vivi7g01782 840 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g01782 840 ProSiteProfiles KHA domain profile. 767 840 IPR021789 -
Vivi7g01782 840 FunFam Potassium channel KAT2 404 541 - -
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Vivi7g01782 840 PANTHER POTASSIUM CHANNEL AKT1 57 837 IPR045319 GO:0005249|GO:0006813
Vivi7g01782 840 Gene3D - 98 342 - -
Vivi7g01782 840 ProSiteProfiles Ankyrin repeat region circular profile. 592 624 - -
Vivi7g01782 840 MobiDBLite consensus disorder prediction 23 37 - -
Vivi7g01782 840 Pfam Ankyrin repeats (3 copies) 567 655 IPR002110 GO:0005515
Vivi7g01782 840 Pfam Ankyrin repeats (3 copies) 662 742 IPR002110 GO:0005515
Vivi7g01782 840 Pfam Cyclic nucleotide-binding domain 436 520 IPR000595 -
Vivi7g01782 840 Gene3D Jelly Rolls 400 537 IPR014710 -
Vivi7g01782 840 Pfam KHA, dimerisation domain of potassium ion channel 766 835 IPR021789 -
Vivi7g01782 840 SUPERFAMILY Voltage-gated potassium channels 89 341 - -
Vivi7g01782 840 ProSiteProfiles cAMP/cGMP binding motif profile. 416 519 IPR000595 -
Vivi7g01782 840 Gene3D - 658 752 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01782 Vivi-Chr7 76716827 76729644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01782 663 742 Ion Channels AT5G37500 32.353 5.40e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01782 K21867 - gmx:100814385 1371.68