Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01775 ATGGAAGCTGAAACTCAACGTAAAGTTGAAGAAACGGCGGCGATGGAAGTTGACACTCAACGTAAAGTTTCAGAAACGGCGGCGATGGAAGTTGACACTCAACGTAAAGTTTCAGAAACGGCGGCGATGGAAGTTGACACTCAACGTAAAGTTTCAGAAACGGCGGCGATGGAAGTTGACACTCAACGTAAAGTTTCAGAAACGGCGGCGATGGAAGTTGACACTCAACGTAAAGTTTCAGAAACGGTGGTGAGCGCTGACACTCATCGTAAAGTTTCAGAAACGGTAGTGAGCGCTGACACTCATCGTAAAGTTTCAGAAACGGTGATGGATATACTCACAAAATGCAACACTGAAGTAGCGACTGAGTTCACCGTCCTAGATGCCGCTTCCAAACGACTCGACCTTTCCGACTCACGCTGCAGGCAATTCGTCAAAAACACCGTCCACTCTTACCTTAACCCCATCGCCACCCACAAGAAACCGGTACCGGAAGAACTTGAGATACACAATGACGACGACTCTGAAGCTGTTATTTGTCAGCTATCAACCAACAGCAAGGTGACTGTTGGAAATTTGAAAGGGATGCCATTGGTGTCAATTAGGGAGTACGATCTAAAAGAAGGAAAACTGCTTCCCACTGTTGAAGGGATAAGTTTCACTCCTGAACAATGGTCAACCTTCAAGAATAATATTCCTGCCATAGAGGAAGCTATCAAAGAGTTGGAAAGAAGGCCAGGATCAGGGCATAGTGGCTGGAAATATGCTGAAGTTTCAAGTTCAGCTGCTGATGTTCCTGTTGAGCCCGCCTCTATTAAGCATGTGCCCATTGAGCTTGTCCCTATTGAGATCGTCCGTTTTGATGGGAAGAATTACCAAGTTTGGGCTGAACAAATAGAATTACTCTTGAAACAGCTGAAGATTAATCATGTGCTTACCGATGCTTGTGCTAGAAAAATATCTAAAGCCAAAGCTACTGAAAAGAGATGGGTAAATGATGATGATTCAACGTGTCGTCGCAACATCTTGTGTCATTTGTCTGATAGTCTATTCAATAAGTATGCTAATGGAAAAATGAGTGCTAAGGAGTTATGGGAAGAGTTGAAACGCGTTTATTTGACTGAGGAATATGGAACCAAGACATCTCTGATGAAAAAGTATATTGAATTTCAAATGGTTGATGAAAAAGCAGTTGCTGATCAAATTCAAGAACTTAATGACATTGCAGACTCTATTGTTGCTGCTGGAATGCAAATGGATGAGAACTTCCGTGTCAGTGTCATCATTTCAAAGCTTCCACTATCATGGAAAAACGTTTGCATCAAGTTAATGTGCGAGGAGCAACTACCTTTTAGGATGTTAATGAAGCACATTACAATAGAGGAAGAATCTCGCAATGGAGTCAAACAAGTTGTTCAACCAGATAGTCAAGGAGGAAACATATGGGCTGACATTAAGCAGTCGCAAGGTTTTAGAAAGTACCTGCCTAATGTCTGCCATATTTGTGGTGAAAAAGGGCATACTTATAGAAAATGTGCTAAATTACCAAGGTTTGATGGGAAGAAGAAATACCATCTTTGGGCTGAACAGATGGAATTACTCTTGAAACAGATGAACATCATTTATGTTCTTACCGAACCATGTCCAACTGCTACATTAGTGAAAAACGATGCTAGTGCTGGAGAAAATTCTAAAGCCAAAGCTGCTGAAAAGAAATGGGTAAATGATGATTTAATGTGTCGTTGCTACATCTTGGGCCATTTATCTGATAGTCTATTCAATAAGTATGCAAATAGAAAAATGAGAGCTAAGGAGTTATGGGAAGAGTTGAAATATGTGTATTTCACCGAGGAATATGGAACCAAAAGATCTCTTGTGAAAAAGTATATTGAATTTCAAATGGTTGATGAAAAAGCAGTTGCTGGTCAAATTCAAGAACTTAATGACATTGCAGACTCTATTGTTGCTGCTGGAATGCAAATAGATGAGAACTTCCAAGTCAGTGTCATCGTTTCAAAGCTTCCACTATCATGGAAAGACTTGTGCATCAAGTTAAAGAGCCAGGAGTATATACCTTTGAAGATGTTAATGGATTGCATAAAAATGGAGGAAAAATCTCGCAATGGAGTCAAGCAAGATGGTGAACTCCATCTGAAAATGTAA 2163 0.4064 MEAETQRKVEETAAMEVDTQRKVSETAAMEVDTQRKVSETAAMEVDTQRKVSETAAMEVDTQRKVSETAAMEVDTQRKVSETVVSADTHRKVSETVVSADTHRKVSETVMDILTKCNTEVATEFTVLDAASKRLDLSDSRCRQFVKNTVHSYLNPIATHKKPVPEELEIHNDDDSEAVICQLSTNSKVTVGNLKGMPLVSIREYDLKEGKLLPTVEGISFTPEQWSTFKNNIPAIEEAIKELERRPGSGHSGWKYAEVSSSAADVPVEPASIKHVPIELVPIEIVRFDGKNYQVWAEQIELLLKQLKINHVLTDACARKISKAKATEKRWVNDDDSTCRRNILCHLSDSLFNKYANGKMSAKELWEELKRVYLTEEYGTKTSLMKKYIEFQMVDEKAVADQIQELNDIADSIVAAGMQMDENFRVSVIISKLPLSWKNVCIKLMCEEQLPFRMLMKHITIEEESRNGVKQVVQPDSQGGNIWADIKQSQGFRKYLPNVCHICGEKGHTYRKCAKLPRFDGKKKYHLWAEQMELLLKQMNIIYVLTEPCPTATLVKNDASAGENSKAKAAEKKWVNDDLMCRCYILGHLSDSLFNKYANRKMRAKELWEELKYVYFTEEYGTKRSLVKKYIEFQMVDEKAVAGQIQELNDIADSIVAAGMQIDENFQVSVIVSKLPLSWKDLCIKLKSQEYIPLKMLMDCIKMEEKSRNGVKQDGELHLKM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01775 720 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g01775 720 ProSiteProfiles Zinc finger CCHC-type profile. 499 512 IPR001878 GO:0003676|GO:0008270
Vivi7g01775 720 Pfam gag-polypeptide of LTR copia-type 333 466 - -
Vivi7g01775 720 Pfam gag-polypeptide of LTR copia-type 573 708 - -
Vivi7g01775 720 PANTHER PBF68 PROTEIN 521 711 - -
Vivi7g01775 720 Pfam Transcriptional Coactivator p15 (PC4) 180 230 IPR003173 GO:0003677|GO:0006355
Vivi7g01775 720 SUPERFAMILY Retrovirus zinc finger-like domains 489 520 IPR036875 GO:0003676|GO:0008270
Vivi7g01775 720 Gene3D Transcriptional Coactivator Pc4; Chain A 170 245 IPR009044 GO:0003677|GO:0006355
Vivi7g01775 720 SUPERFAMILY ssDNA-binding transcriptional regulator domain 179 242 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01775 Vivi-Chr7 76622473 76625966 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Vivi7g01775 Retrotran_gag_2 1e-15 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01775 - - vvo:131617507 1432.54