Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01756 ATGAAGTCTCCGAAGCTGAAAAAAACTCTTCTGGTTCTTTTCACGGCGAGTTTATTAATCGCCATTGTTTCCGGCGCCGATCTAGCTTCCGATAGAGAAACTCTACTGATTTTAAGGAACACAGTTGGAGGACGAACCCGATCATGGAACGTGTCCGAGACTAACCCGTGTTTATGGCCCGGCGTTTCCTGCCAAAACGAAAGAGTCACGTCGTTGAGGCTACCGGGGATGGGTCTCGCTGGTAACCTTCCGATTGGTTTAGGAAACCTCACTGAATTGCAGATACTTTCCCTCCGGTTCAACTTGTTAACCGGACCAATTCCTTCGGATTTTTCAAAACTGGTTTCTCTTCGGAATCTTTACCTTCAGAATAATTTTCTCTCCGGTGAGGTTCCTGAATTTGTGTTTGGGTTGCAGAATTTGACTCGGTTGAGTTTAGCTCATAACAATTTCAGCGGTGAAGTTTCTTCTAGTTTCAACAAGCTCACTCGTTTGGATACACTCTCTTTGGAGCAAAACCGGTTCACCGGTTCGGTGCCTGACCTTAATGTTCCTCCTTTACATGTATTCAATGTGTCGTTTAACAATTTAACCGGGCCGATTCCGTCGAGGTTTTCGCGTTTAGATATAAGCGCTTTTACGGGGAATGAGCTTTGTGGGAGTCCCCTTAAAATACCTTGTCCTGGAAACAATGACAGAAATAAGAAAAATGGGTTATCTGGTGGAGCTATTGCTGGTATTGTAATTGGCTGTGTTTTTGGTTTTGTGTTGATTCTGGTTCTTTTGGTGTTCTTGTGTAGAAAAAGATCAAAAAGTGATTCTGATAATGTAGCACATGCCAAGAGTGTTGATGTTGAAAATGGTGCTGGTGATGGGGGTGTGAGTAATTCAGGTTCTGGTTTGGCTTCGGCTTCGGTTTCAGCTTCGGGCGTGTCGTTACAAAAGAGTTTGGTGTTTGTTGGGAATGTGACTAGAAAGTTTAGTTTAGAAGATTTGTTAAGAGCTTCTGCAGAAGTTTTGGGAAAAGGGACATTTGGAACAGCTTATAAGGCAGCATTGGAGATGGGAGTGACAGTGGCTGTGAAAAGGTTGAAGGATGTTACTGCAAGTGAAAAGGAATTCAAGGAGAAAATGGAGGAGGTAGGGAAATTGGTTCATGAGAACCTGGTCCCACTTAGGGGTTATTATTATAGTAGAGATGAAAAGCTTGTTGTGTATGATTACATGCCAATGGGAAGCTTATCTGCACTCTTGCATGCAAATAATGGAACTGGAAGGACTCCACTAAATTGGGAAACAAGGTCAACCATAGCCCTTGGTGCTGCCCAAGGGATTGCATACCTACACTCACAAAGTCCAACATCCTCCCATGGAAACATCAAGTCATCAAACATCCTTCTCACCAAATCTTACGAATCCCGTGTCTCCGACTTCGGCCTAGCGTATCTCGCTCTTCCAACCGCTACACCCAACCGAGTTTCTGGTTACCGTGCACCAGAGGTCACCGACACCCGCAAAGTATCCCAAAAGGCGGACGTCTACAGCTTCGGCATTATGCTTCTGGAGCTTCTCACAGGAAAAGCTCCTACTCATTCTACGCTAAACGATGAAGGAGTAGACCTACCGAGATGGGTCCAGTCGATCATTCAAGACGAGTGGAACACTGATGTTTTCGACATGGAGCTTCTGAGATACCAAAATGTTGAGGACGAAATGGTGAAACTTTTGCAGCTTGCTCTTGAATGTACTGCTCAATATCCTGATAAGAGACCTTCCATGGATGTGGTTGTAAGATTGATTGGGGAAATTTGTCATTCTAGTAATGTGAAAGAGCAAGAAGAGATTATTGAGGAATCATGA 1860 0.4414 MKSPKLKKTLLVLFTASLLIAIVSGADLASDRETLLILRNTVGGRTRSWNVSETNPCLWPGVSCQNERVTSLRLPGMGLAGNLPIGLGNLTELQILSLRFNLLTGPIPSDFSKLVSLRNLYLQNNFLSGEVPEFVFGLQNLTRLSLAHNNFSGEVSSSFNKLTRLDTLSLEQNRFTGSVPDLNVPPLHVFNVSFNNLTGPIPSRFSRLDISAFTGNELCGSPLKIPCPGNNDRNKKNGLSGGAIAGIVIGCVFGFVLILVLLVFLCRKRSKSDSDNVAHAKSVDVENGAGDGGVSNSGSGLASASVSASGVSLQKSLVFVGNVTRKFSLEDLLRASAEVLGKGTFGTAYKAALEMGVTVAVKRLKDVTASEKEFKEKMEEVGKLVHENLVPLRGYYYSRDEKLVVYDYMPMGSLSALLHANNGTGRTPLNWETRSTIALGAAQGIAYLHSQSPTSSHGNIKSSNILLTKSYESRVSDFGLAYLALPTATPNRVSGYRAPEVTDTRKVSQKADVYSFGIMLLELLTGKAPTHSTLNDEGVDLPRWVQSIIQDEWNTDVFDMELLRYQNVEDEMVKLLQLALECTAQYPDKRPSMDVVVRLIGEICHSSNVKEQEEIIEES 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01756 619 PANTHER OS05G0588300 PROTEIN 13 605 - -
Vivi7g01756 619 Gene3D Phosphorylase Kinase; domain 1 302 408 - -
Vivi7g01756 619 SUPERFAMILY L domain-like 44 208 - -
Vivi7g01756 619 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Vivi7g01756 619 SUPERFAMILY Protein kinase-like (PK-like) 338 598 IPR011009 -
Vivi7g01756 619 Gene3D Transferase(Phosphotransferase) domain 1 409 618 - -
Vivi7g01756 619 Gene3D Ribonuclease Inhibitor 184 230 IPR032675 -
Vivi7g01756 619 FunFam Probable inactive receptor kinase At1g48480 409 612 - -
Vivi7g01756 619 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Vivi7g01756 619 FunFam Probable inactive receptor kinase RLK902 28 183 - -
Vivi7g01756 619 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01756 619 FunFam pollen receptor-like kinase 1 303 408 - -
Vivi7g01756 619 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Vivi7g01756 619 Pfam Protein kinase domain 337 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01756 Vivi-Chr7 76184382 76187685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01756 27 598 Receptor kinase-like Gene Family AT1G48480 56.579 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g01756 Pkinase 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01756 - - gmx:100801582 818.535