Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01754 ATGGGAAGGCAACCTTGTTGTGAGAAAGTGGGATTGAAAAAAGGGCCATGGACTGCTGAGGAAGACAAGAAGCTCATCACTTTCATCCTCACTAATGGACAATGCTGTTGGAGGGCTGTCCCTAAATTGGCAGGGTTATTAAGGTGTGGAAAAAGTTGTAGACTTAGATGGACAAATTACTTGAGACCAGATTTAAAAAGAGGACTTTTATCAGAATATGAAGAGAAAATGGTCATTGATCTTCATGCTCAACTTGGAAACAGATGGTCTAAGATTGCTTCTCATCTACCAGGAAGAACAGATAATGAGATAAAAAATCATTGGAACACTCACATAAAGAAAAAGCTCAAGAAAATGGGGATTGACCCTATCACTCACAAACCACTAATTAGTAGTACAATTAATCAAACTCAAAATCAAGCTAAACAACAAGTACACCAACCGATAGAAGAAAAACAACAAAACCAACAACCTTTGACAATTGACATTGACACAAAGATTGAGAAGCAAGAGACTTCAATTGAATCATCAAGTAACATTGAAAAGAAAGAAAAAGGTGAAACTACAATAACACCCTTATTTAACACAATGGAGTTAATTGATGGATTTTGTATAGAGGAAGTTCCAATGATAGAACCTAATGAAATTATAGTGTCTAATTCATCTTCATCAACCTCTTCATCATCTACATCAAATTCAACCAATTTTCTTGAAGATCTCCAACTCCCTGATTTTGAATGGTCTTATAATGATAACAAGGAAGAGAACAATAGCAACAATTTGGCTTTTTGGGATGATGACTTTATTAGTACCTTGAATTTTCTGATTAATGATGATAATAATGATGATGGTGGTTGTGTTAATAATGGTGAAAGAAAGCAAGCATTTGATGAGATGATTGTGGATTCAGAATCATGGGCATATAGATTGTTTTGA 936 0.3472 MGRQPCCEKVGLKKGPWTAEEDKKLITFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPITHKPLISSTINQTQNQAKQQVHQPIEEKQQNQQPLTIDIDTKIEKQETSIESSSNIEKKEKGETTITPLFNTMELIDGFCIEEVPMIEPNEIIVSNSSSSTSSSSTSNSTNFLEDLQLPDFEWSYNDNKEENNSNNLAFWDDDFISTLNFLINDDNNDDGGCVNNGERKQAFDEMIVDSESWAYRLF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01754 311 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 246 - -
Vivi7g01754 311 FunFam Myb transcription factor 71 133 - -
Vivi7g01754 311 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi7g01754 311 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Vivi7g01754 311 CDD SANT 16 61 IPR001005 -
Vivi7g01754 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi7g01754 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi7g01754 311 Gene3D - 11 67 - -
Vivi7g01754 311 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi7g01754 311 SMART sant 66 114 IPR001005 -
Vivi7g01754 311 SMART sant 13 63 IPR001005 -
Vivi7g01754 311 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi7g01754 311 Gene3D - 71 116 - -
Vivi7g01754 311 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Vivi7g01754 311 CDD SANT 74 112 IPR001005 -
Vivi7g01754 311 FunFam MYB transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01754 Vivi-Chr7 76128729 76131030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01754 1 311 MYB Transcription Factor Family AT5G16600 47.727 2.28e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g01754 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01754 K09422 - gmx:100792103 411.764