Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01686 ATGCTCGCTGCCGCCTCGAGGTACGCCAGACCCACCACCGGCGGCGGCACTCGTGTCCGATCACTTTTATCTTCTTCCGCCATCGCCACAACTTACTCAATTCCCACCGCAACTGGCTTCCGTTACGGTTACACTAACGGAATCAGTTACAATAACCGCAACACCAGAACATACCCAAACTTACTCTTCTCCGTAAAAGGATTTCTCTCTGATTCCTCCTCCTCCTCATCATCATCATATGGCAGAAATTCGAAGGTGGATGGAAGAGCGTTGTTCTCAACTTCAGCTAAAACTGATGATGGAAGTCAGAACCAGAAAAGTTCTTCTCCTGTTGCTAAATTGCCTCCAGTTGTTGGTGGACAAGTTGCCGATATTAAGATCCTTCGAGTGCTTGCGAGTTACCTTTGGATGAAAGATAATCTCGAATTTCGGTTTCGGGTTATTGCTGCATTAGTTTTACTTGTTGGAGCTAAGGTTGTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTGGATTGGTTGAATACTGCCACGGGCACTGCTGGCGCTGTTGCTTCGAATCCTACTGCTATGGCGCTTTTCGCTACTCCCGTGGCAGTGTTGATTGGATATGGGATTGCACGTTCTGGAGCTTCTGCCTTCAACGAACTGCGGACTGCTTTGTTTTCCAAGGTAGCACTGCGAACAATTCGATTAGTTTCAAGGAAGGTCTTTTCACATTTGCACGACCTTGACCTTCGATATCATCTAAGTCGAGAAACTGGTGCATTAAGTCGGATAATTGATCGTGGTAGCCGTGCTATAAATTTCATTCTCTCCGCCATGGTGTTCAATGTAGTACCCACCGTATTAGAGATATCTATGGTATCAGGTATACTGGCCTACAAATTTGGAGCACCTTTTGCATGGATTACTTCACTGTCAGTTGCCGCTTATGTTGTTTTCACACTTTCTATCACACAGTGGAGGACTAAATTCAGAAAAGCCATGAATAAGGCAGATAATGATGCTAGTACTAGGGTTATTGATTCACTTATTAACTATGAGACGGTCAAATATTTCAATAATGAAGCTCACGAAACTGATCATTATGACAAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACCCAACACAGTCTTGCTTTGTTGAACTTTGGTCAAAATGCTATATTTAGTGCTGCTCTTTCAACAGCAATGGTTCTGTGTTCTCATGGGATCATGAATGGCACAATGACCGTTGGTGATTTGGTGATGGTAAATGGGCTTCTCTTCCAACTGTCTCTTCCCCTCAATTTCCTTGGTAGTGTTTATCGCGAAACTATACAGAGTCTAATTGACATGAAATCCATGTTCCAATTACTTGAGGAAAGAGCAGACATTAAGGACAAAGAAAATGCCAAACCTCTCAAACTTACTGGGGGGAGGGTTCAATTTGATAATGTACATTTTGGTTACCTCACAGAAAGAAAGATACTGGATGGAATATCATTACTTGTACCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTCAGAATGCTATTCAGATTTTTTGATCCCCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGATATAACCCTTGAGAGTTTACGAAAGTCTATTGGCGTTGTTCCACAAGATACTGTACTTTTCAATGATACTATATTTCATAACATTCACTATGGTCGGCTTTCAGCAACAGAAGAGGAGGTCTATGAAGCTTCCCGTCAAGCAGCAATCCATGACACTATAATGAATTTTCCTGAGAAATACTCCACTGTTGTGGGAGAGCGAGGGCTCAAGCTAAGTGGTGGTGAGAAGCAGCGTGTTGCTCTTGCCCGAGCATTCTTAAAAGCACCTGCTATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTATCAAAGAATCGAACTTCCATATTCATTGCACACAGGCTGACCACTGCAATGCAGTGTGATGAGATTATTGTTTTGGAAAATGGAAAGGTGGTTGAGCATGGACCACATGAAACGCTCTTAGAAAATGCAGGGAGATATGCGCAGCTTTGGGGACAACAAAATAACTCTATTGACTCAATTGACGCAGCCATCAAATTGGGAGCATAA 2190 0.4269 MLAAASRYARPTTGGGTRVRSLLSSSAIATTYSIPTATGFRYGYTNGISYNNRNTRTYPNLLFSVKGFLSDSSSSSSSSYGRNSKVDGRALFSTSAKTDDGSQNQKSSSPVAKLPPVVGGQVADIKILRVLASYLWMKDNLEFRFRVIAALVLLVGAKVVNVQVPFLFKLAVDWLNTATGTAGAVASNPTAMALFATPVAVLIGYGIARSGASAFNELRTALFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRAINFILSAMVFNVVPTVLEISMVSGILAYKFGAPFAWITSLSVAAYVVFTLSITQWRTKFRKAMNKADNDASTRVIDSLINYETVKYFNNEAHETDHYDKYLKRYEDAALKTQHSLALLNFGQNAIFSAALSTAMVLCSHGIMNGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLIDMKSMFQLLEERADIKDKENAKPLKLTGGRVQFDNVHFGYLTERKILDGISLLVPAGKSVAIVGTSGSGKSTILRMLFRFFDPHSGSIKIDDQDIRDITLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEASRQAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSVSKNRTSIFIAHRLTTAMQCDEIIVLENGKVVEHGPHETLLENAGRYAQLWGQQNNSIDSIDAAIKLGA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01686 729 CDD ABC_6TM_ATM1_ABCB7 150 453 - -
Vivi7g01686 729 FunFam ATP-binding cassette sub-family B member 7 120 467 - -
Vivi7g01686 729 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 479 713 IPR003439 GO:0005524
Vivi7g01686 729 Pfam ABC transporter transmembrane region 147 432 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g01686 729 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 148 445 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g01686 729 CDD ABCC_ATM1_transporter 479 714 - -
Vivi7g01686 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 714 IPR027417 -
Vivi7g01686 729 FunFam ABC transporter B family member 25 471 725 - -
Vivi7g01686 729 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 36 710 IPR039421 -
Vivi7g01686 729 SMART AAA_5 504 690 IPR003593 GO:0016887
Vivi7g01686 729 ProSitePatterns ABC transporters family signature. 616 630 IPR017871 GO:0005524|GO:0016887
Vivi7g01686 729 Gene3D ABC transporter type 1, transmembrane domain 134 469 IPR036640 GO:0005524|GO:0016020
Vivi7g01686 729 Gene3D - 470 725 IPR027417 -
Vivi7g01686 729 Pfam ABC transporter 495 644 IPR003439 GO:0005524
Vivi7g01686 729 SUPERFAMILY ABC transporter transmembrane region 142 458 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01686 Vivi-Chr7 74781697 74799574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01686 315 715 Calmodulin-binding Proteins AT2G36910 35.437 6.09e-64 229