Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01681 ATGGAGGTGCCATCATACTTATATCTATATCCCATTCAAGAAGATGAAGATGATTTGCCACCACCCATTCCACCATTCAACAATGTTGAGAACAAAATCCTTTCTCCTAAGAATAAATCCGCCAAGAAAATTCAACATTGGAATGCAAAAGAGCACAGGTTATTTTTAGAAGGACTCGAAAGGTATGGCAAGGGAAATTGGAAAAAAATTTCAAAGCATGTTGTTACAAAATCATCAACTCAAGTGGCTAGCCATGCTCAAAAGTATTTCATCAGAAATCAACAGAATAATGATTTATCAAACAAGAAAAAGGAAAGAAGAAGCCAATTTGACAACATTCCTTCATTCTATGGAAAATTTTACCCTGTTGAATTCTTTAACTTCATCCAAAGACAACCATTTATAGATGAATTCCTTCAAAATCCACATCAACAAGTCAAAGAATAG 447 0.34 MEVPSYLYLYPIQEDEDDLPPPIPPFNNVENKILSPKNKSAKKIQHWNAKEHRLFLEGLERYGKGNWKKISKHVVTKSSTQVASHAQKYFIRNQQNNDLSNKKKERRSQFDNIPSFYGKFYPVEFFNFIQRQPFIDEFLQNPHQQVKE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01681 148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 94 IPR017930 -
Vivi7g01681 148 CDD SANT 47 90 IPR001005 -
Vivi7g01681 148 ProSiteProfiles Myb-like domain profile. 47 90 IPR001005 -
Vivi7g01681 148 PANTHER TRANSCRIPTION FACTOR KUA1 37 112 - -
Vivi7g01681 148 ProSiteProfiles SANT domain profile. 47 94 IPR017884 -
Vivi7g01681 148 Pfam Myb-like DNA-binding domain 46 90 IPR001005 -
Vivi7g01681 148 Gene3D - 44 95 - -
Vivi7g01681 148 SMART sant 43 92 IPR001005 -
Vivi7g01681 148 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 92 IPR006447 GO:0003677
Vivi7g01681 148 SUPERFAMILY Homeodomain-like 41 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01681 Vivi-Chr7 74646089 74646628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01681 47 85 EF-hand Containing Proteins AT3G07740 46.154 9.11e-08 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g01681 Myb_DNA-binding 6.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01681 - - vvo:131619351 175.252