Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01680 ATGGATGAAAATTGGCTCAACAATTTTTTTGCTTTTTGGGAAGTTAATGGTATGGAAGTTGATGCTGATTTGCCAACACACTTAAGTGATGATTTTATTCCAATCCACAATGTTTCAGCTGATGAGAACAAAACTCTTCCTCCTAAGAATAAGCCAACCAAAAAAATTCAACATTGGAATGAAGAAGAACACAGGTTATTTTTGGAAGGGCTCCAATTATACGGCAAGGGAAATTGGAAAAAGATTTCAAAATATGTTGTTTCAAAAACATCAACTCAAGTTGCTAGCCATGCTCAAAAATATTTTATCCGAATTCAGCAAAACAATAATTTATCAAATAAGAAGAAAAGAAAAAGCAAATTTGACAACATTCCTTCGTACCCTATTGAGAGCTTTAACTTCACCCACACACAACCATTTATAGAAGAATTCCTACCACAAGAATCTCAACAAATCCAAGAATAG 465 0.3333 MDENWLNNFFAFWEVNGMEVDADLPTHLSDDFIPIHNVSADENKTLPPKNKPTKKIQHWNEEEHRLFLEGLQLYGKGNWKKISKYVVSKTSTQVASHAQKYFIRIQQNNNLSNKKKRKSKFDNIPSYPIESFNFTHTQPFIEEFLPQESQQIQE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01680 154 Gene3D - 56 107 - -
Vivi7g01680 154 CDD SANT 59 102 IPR001005 -
Vivi7g01680 154 ProSiteProfiles SANT domain profile. 59 106 IPR017884 -
Vivi7g01680 154 Pfam Myb-like DNA-binding domain 58 102 IPR001005 -
Vivi7g01680 154 SUPERFAMILY Homeodomain-like 52 106 IPR009057 -
Vivi7g01680 154 ProSiteProfiles Myb-like domain profile. 51 102 IPR001005 -
Vivi7g01680 154 SMART sant 55 104 IPR001005 -
Vivi7g01680 154 NCBIfam myb-like DNA-binding domain, SHAQKYF class 54 104 IPR006447 GO:0003677
Vivi7g01680 154 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 106 IPR017930 -
Vivi7g01680 154 PANTHER TRANSCRIPTION FACTOR KUA1 49 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01680 Vivi-Chr7 74633169 74633775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01680 59 104 EF-hand Containing Proteins AT3G07740 39.130 2.48e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g01680 Myb_DNA-binding 4.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01680 - - vvo:131619351 303.523