Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01674 ATGAATTTTTCAAAGAGTTGTGGATGTGAAATTGTTCTATTGTTTCTGTTCTGCTTCTGTTTTCTATTGGCTGCTACTCAAAAAACTGACCCAATTGAAGTTGATGCATTGAGAATCATAAAGCAAAATTTGATTGATATTAGTGGAAATTTGAGTAACTGGGGTGATGGAGATCCGTGTACATCCAAGTGGAGAGGAGTTATGTGCTCCAATACAACATCAGATGATGATGACTTTCTACATGTTCAACGATTGCATCTAATGAACATGAGTTTGGCTGGAAATTTGGTACCTGAGATAGGCAACTTATCTCATCTGAAAATATTGGACTTTATGTGGAACAACATAACCGGGAGCATCCCGAAGGAAATCGGCAATATCAAAACTCTAAGACTCTTGCTCTTGAATGGAAATCAATTAACAGGTCATTTACCAGAAGAGCTCGGATATCTTCCCGTCCTGAACAGAATGCAAATTGATCAAAATAATCTCACAGGACCAATACCTTTATCCTTCGCAAACTTGACAAATGCGCAACACTTTCATATGAACAACAATTCACTCAGTGGACCAATTCCACCAGAGCTTTCTGGCTTAAGAAACCTTCTTCATCTTCTTCTTGACACCAACAATTTATCAGGAAATCTCCCAGATGAGCTTGCTGAGATGCCAAGCCTAAAGATACTTCAACTTGATAACAACAACTTTGGTGGAAATAGCATTCCAAGTTCTTATGAAAACATGTCAAAGTTATTGAAACTGAGCCTTAGGAACTGCAATTTGACAGGACCAATTCCTGATTTAAGCAAGATACCAGACCTTAGTTATCTTGACCTCAGTTTCAATCAATTGAATGAATCTATTCCTACTAATAAGCTATCTGAAAACATCACAACCATTGATTTATCAAATAATAAGCTTGATGGTACTATTCCATCTTACTTTTCTGATCTTCCACATCTTCAGAAATTGTCAATTGCAAACAATGCACTAAGTGGCAATGTTTCCTCTTCCATTTGGCAGAACAATACTTCAAATGGATCAGAAAAACTTCTCTTGAACATGCAAAATAATCAACTCACAGGTATATCAGGCAGTACAACAAGTCTTCCTTCAAATGTCACACTCTTGCTTGAGGGGAATCCTATATGCTCAAACAACAACAACACCAACACCATAGTTAAATCCTGCGGATCCGAAACTGAAATTGACATGAATGGTAACTCCAATATTACCTGTCCAAGCCAACAATGCCCTCCTCCTTACGAATATTCTCCGGAGTGTGTCTGTGCAGTGCCGTTGATCGTGTATTATCGATTGAAGAGTCCGGGATTTTCAGATTTTAATACATATGTGGAAGAATTTGAAAGCTTCTTGTCAAGTGGCCTTAACATAAATAAGAATCAGCTATTCATTAATAGTTTTACGTGGGAAGACGGTAGATTGCGAATGCATTTGAAGCTTTTTCCCGTATATGTTGATAATGCAAACTCTTATACTTTCAATGAGAGTGAGGTTATTAGGATAAGAGACTTGTTTAGAGAATGGACTATTCATGACAATGACTTGTTTGGGCCTTATGAGCTTCTCGAATTCATTCTCCTCGATCCTTACAATGACGAGCTTGTCGATTCTTCAAGTTCGGGAATAAGCACAGGTGCGGTGGTTGGAATCGTGTTAGGAGCGATTGCCTGTTCAGTTGCATTATCCGCAATTGTTGCCATTTATATATTAAGAATACGGTTGAAAGATTACCGTACACTCTCGAAAGGGCGTAAAGGTTCTAAGATCTCAATAAAAATTGATGGTGTGAGATCATTCAATTATGAAGAAATGGCTTGGGCTACAAGCAACTTTAGTGAATCTGCTCAAATTGGACAAGGAGGGTATGGGAAGGTTTATAAAGGTAATCTTCATGATGGAACTGTTGTTGCCATAAAACGCGCGCAAGAAGGTTCGCTGCAAGGGGAGAGGGAGTTTCTTACAGAAATACAATTGCTATCGAGGTTGCATCATCGCAACCTTGTGTCTCTGATTGGATATTGTGATGAAGATGGTGAACAGATGCTGGTCTATGAATATATGCCAAATGGAACACTAAGGGATCACCTTGCTGCTTATTCTAAAGAACCTCTTAGTTTTGCAATGAGATTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTGTACCTACACACTGAGGCCGATCCTCCAATATTCCACAGAGATGTTAAAGCTAGTAACATATTATTAGACTCAAAGAACATAGCAAAAGTTGCTGATTTTGGACTTTCAATACTAGCACCAGTTCCAGATATCGAAGGCAATTTGCCTGCTCATGTATCTACCATTGTAAAAGGGACCCCGGGTTACCTCGACCCAGAGTATTTCTTGACGCGCAAGTTAACTGATAAAAGTGATGTTTATAGTCTCGGTGTTGTATTTCTAGAAATCGTGACTGGAAAACCACCAATCTTCCATGGCGAAAACATTATTAGACAGGTTAAATTGGCATTCGAATCGGGTGGAATATTTTCGATAGTTGATAACCGAATGGGATTTTACACTTCTGAGTGTGTGGAAAAGTTATTGATTTTGGCTTTAAAGTGTTGCAAAGATAACCCCGATGAAAGGCCTAAAATGCAAGAAGTTGCCAGAGAAGTCGAAAACATATTGTCGATGATGCCTGAATATCATGCCAAAAAGGGTGGTGAATATGATACAAGTGATTCTGGAGCTACATTCAGTTCACAAGCTTCATCATCTGTTAACAAGAATCCTTTTGTTTCAGGAGATAGTTTGGGGATTGAGCTTGTTAGTGGAGATGTACCTACCATTAGACCAAGATAG 2850 0.3874 MNFSKSCGCEIVLLFLFCFCFLLAATQKTDPIEVDALRIIKQNLIDISGNLSNWGDGDPCTSKWRGVMCSNTTSDDDDFLHVQRLHLMNMSLAGNLVPEIGNLSHLKILDFMWNNITGSIPKEIGNIKTLRLLLLNGNQLTGHLPEELGYLPVLNRMQIDQNNLTGPIPLSFANLTNAQHFHMNNNSLSGPIPPELSGLRNLLHLLLDTNNLSGNLPDELAEMPSLKILQLDNNNFGGNSIPSSYENMSKLLKLSLRNCNLTGPIPDLSKIPDLSYLDLSFNQLNESIPTNKLSENITTIDLSNNKLDGTIPSYFSDLPHLQKLSIANNALSGNVSSSIWQNNTSNGSEKLLLNMQNNQLTGISGSTTSLPSNVTLLLEGNPICSNNNNTNTIVKSCGSETEIDMNGNSNITCPSQQCPPPYEYSPECVCAVPLIVYYRLKSPGFSDFNTYVEEFESFLSSGLNINKNQLFINSFTWEDGRLRMHLKLFPVYVDNANSYTFNESEVIRIRDLFREWTIHDNDLFGPYELLEFILLDPYNDELVDSSSSGISTGAVVGIVLGAIACSVALSAIVAIYILRIRLKDYRTLSKGRKGSKISIKIDGVRSFNYEEMAWATSNFSESAQIGQGGYGKVYKGNLHDGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEDGEQMLVYEYMPNGTLRDHLAAYSKEPLSFAMRLKIALGSAKGLVYLHTEADPPIFHRDVKASNILLDSKNIAKVADFGLSILAPVPDIEGNLPAHVSTIVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIVTGKPPIFHGENIIRQVKLAFESGGIFSIVDNRMGFYTSECVEKLLILALKCCKDNPDERPKMQEVAREVENILSMMPEYHAKKGGEYDTSDSGATFSSQASSSVNKNPFVSGDSLGIELVSGDVPTIRPR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01674 949 FunFam Predicted protein 172 394 - -
Vivi7g01674 949 SUPERFAMILY Protein kinase-like (PK-like) 604 898 IPR011009 -
Vivi7g01674 949 SMART serkin_6 619 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01674 949 FunFam Leucine-rich repeat receptor-like kinase 32 148 - -
Vivi7g01674 949 Gene3D Ribonuclease Inhibitor 295 410 IPR032675 -
Vivi7g01674 949 CDD STKc_IRAK 625 891 - -
Vivi7g01674 949 SUPERFAMILY L domain-like 46 415 - -
Vivi7g01674 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Vivi7g01674 949 FunFam Leucine-rich repeat protein kinase family protein 583 694 - -
Vivi7g01674 949 MobiDBLite consensus disorder prediction 909 926 - -
Vivi7g01674 949 Gene3D Phosphorylase Kinase; domain 1 590 694 - -
Vivi7g01674 949 Gene3D Ribonuclease Inhibitor 187 294 IPR032675 -
Vivi7g01674 949 ProSiteProfiles Protein kinase domain profile. 619 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01674 949 Gene3D Transferase(Phosphotransferase) domain 1 695 910 - -
Vivi7g01674 949 Pfam Protein kinase domain 620 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01674 949 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vivi7g01674 949 MobiDBLite consensus disorder prediction 902 926 - -
Vivi7g01674 949 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Vivi7g01674 949 PANTHER RECEPTOR-LIKE PROTEIN 55 43 891 - -
Vivi7g01674 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 695 904 - -
Vivi7g01674 949 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01674 Vivi-Chr7 74536584 74542475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01674 12 901 Receptor kinase-like Gene Family AT5G01950 56.049 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi7g01674 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01674 - - gmx:100801035 1318.14