Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01671 ATGGCAGCGGTTACATTGAATTCAATTGTCAATATCTTATACCTTACTATAAGCAAACATTCCATGAAGTTCTACTCATCTCCGTTGCAAGCTTTCATTTTGATCATTATAATTCTTTCTCCTCTAGTTATTGCTGACCTGAATTCTGATAAGCAAGCCCTTCTTGATTTTGTTACTTCCGTCCCTCATCGTCGGAACCTTAAATGGGACCTAACTACCTCAATATGTACATCTTGGATAGGCATCACTTGCAATCCAAACCTTACTCGTGTTGTTTCTCTCCGGCTCCCTGGAGTCGGACTAGTAGGCACCATTCCAGCCGATACACTCGGCAAAATTGACTCGCTCAAAACTATTAGCCTTCGCTCGAACCTACTTAGTGGAAATCTACCTCGGGATATTACTTCTCTTCCGTCTCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTGAAATACCAACCTCGTTGTCATCGCAACTCAATGCACTTGTTTTGTCATACAATTCATTCACCGGTAACATTCCGAAGCCATTACAAAACTTAACACAACTAACCCATTTGAGCCTCGAGAACAATTCGTTATCTGGACCGATACCTGATCTCCATGTCAATCTCAAACAGTTGAATTTAAGTTACAACCATTTGAATGGCTCTATCCCTTCATCTCTACATACTTTCCCAAGTTCATCCTTTGAAGGGAACTCTCTTTTATGTGGATTACCTCTAAAGTCGTGCTCATCAGTCCCTCCTTCATCGGTGCCTCCTGCATCGGCTCCTGTAAAACATAACTCCAAAAAAAAACTTAGTAAAGGAGCTATCATTGCAATTTCTGTTGGTGGAGCTGTTCTGTTGTTTTTTGTAGTACTTGTCATTGTTCTTTGTTGTTTAAAGAAAAAAGATAACGGAAACTCGAGAGTTGTTAAAGCGAAGGGACCTAGTGGTGGTGGTGGTGGAAGGACAGAAAAACCGAAAGAAGAGTTTGGAAGTGGCGTGCAAGAATCTGAGAAAAACAAATTGGTTTTCTTTGAGGGCTGTTCTTATAATTTCGATCTCGAGGATTTGTTGAGAGCTTCGGCTGAGGTTCTGGGAAAGGGAAGTTATGGAACCGCATATAAGGCTATCTTGGAGGAAGCAACAACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTAGGAAAGAGGGAATTTGAACAGCAGATGGAAATTGTTGGAAGCATTGGAAATCACCCGAATGTCGTTCCACTTCGCGCTTATTATTATTCGAAGGATGAGAAGCTTTTGGTTTGTGACTATTTCCCAAATGGCAATCTATCTATACTCTTGCATGGTACTAGGACAGGCGGACGAGCTTGCTTAGATTGGAACATGCGAGTAAAAATCACTCTCGGAATTGCTCGGGGAATTGCGCATTTACATTCAGTTGGCGGTCCAAAATTCACACACGGAAATGTGAAATCCTCCAATGTCCTCATAAGCCAAGATAACGATGGCTGCATTTCAGATTTCGGCCTGACACCAATCATGAACGTTCCTGCGACCCCTTCCAGAACTGCAGGCTACCGTGCTCCCGAGGTAATCGAAACTCGGAAACACACTCATAAATCAGACGTTTACAGTTTCGGTGTCCTCCTTTTGGAAATGCTTACAGGTAAAGCACCACAACAGTCTCCAGTACGCGATGACATGGTTGATCTGCCTAGGTGGGTTCAGTCTGTCGTTAGGGAGGAATGGACCGCCGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCTTGTGTTGCCAAGGTTCCAGATATGAGGCCTAACATGGAGGAAGTAGTGAGAATGATTGAAGAAATTCGACAATCTGACTCGGACAACAACCGACCGTCTTCTGACGAGAATAAATCCAAGGATTTAAATGTTCAAACTCCATGA 1965 0.4254 MAAVTLNSIVNILYLTISKHSMKFYSSPLQAFILIIIILSPLVIADLNSDKQALLDFVTSVPHRRNLKWDLTTSICTSWIGITCNPNLTRVVSLRLPGVGLVGTIPADTLGKIDSLKTISLRSNLLSGNLPRDITSLPSLQYLYLQHNNLSGEIPTSLSSQLNALVLSYNSFTGNIPKPLQNLTQLTHLSLENNSLSGPIPDLHVNLKQLNLSYNHLNGSIPSSLHTFPSSSFEGNSLLCGLPLKSCSSVPPSSVPPASAPVKHNSKKKLSKGAIIAISVGGAVLLFFVVLVIVLCCLKKKDNGNSRVVKAKGPSGGGGGRTEKPKEEFGSGVQESEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEEATTVVVKRLKEVVVGKREFEQQMEIVGSIGNHPNVVPLRAYYYSKDEKLLVCDYFPNGNLSILLHGTRTGGRACLDWNMRVKITLGIARGIAHLHSVGGPKFTHGNVKSSNVLISQDNDGCISDFGLTPIMNVPATPSRTAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPVRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPNMEEVVRMIEEIRQSDSDNNRPSSDENKSKDLNVQTP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01671 654 ProSitePatterns Protein kinases ATP-binding region signature. 364 395 IPR017441 GO:0005524
Vivi7g01671 654 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 640 - -
Vivi7g01671 654 FunFam pollen receptor-like kinase 1 326 433 - -
Vivi7g01671 654 Gene3D Ribonuclease Inhibitor 48 159 IPR032675 -
Vivi7g01671 654 Gene3D Ribonuclease Inhibitor 160 205 IPR032675 -
Vivi7g01671 654 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515
Vivi7g01671 654 MobiDBLite consensus disorder prediction 629 654 - -
Vivi7g01671 654 MobiDBLite consensus disorder prediction 308 331 - -
Vivi7g01671 654 PANTHER OS05G0588300 PROTEIN 33 642 - -
Vivi7g01671 654 SUPERFAMILY L domain-like 53 245 - -
Vivi7g01671 654 FunFam Leucine-rich repeat receptor-like protein kinase 49 159 - -
Vivi7g01671 654 MobiDBLite consensus disorder prediction 629 645 - -
Vivi7g01671 654 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Vivi7g01671 654 Gene3D Transferase(Phosphotransferase) domain 1 434 652 - -
Vivi7g01671 654 SUPERFAMILY Protein kinase-like (PK-like) 362 635 IPR011009 -
Vivi7g01671 654 Gene3D Ribonuclease Inhibitor 207 248 IPR032675 -
Vivi7g01671 654 Pfam Protein kinase domain 361 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01671 654 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Vivi7g01671 654 ProSiteProfiles Protein kinase domain profile. 358 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01671 654 Pfam Leucine rich repeat 102 150 IPR001611 GO:0005515
Vivi7g01671 654 FunFam Leucine-rich repeat receptor-like protein kinase 160 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01671 Vivi-Chr7 74408253 74412041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01671 21 652 Receptor kinase-like Gene Family AT5G58300 68.224 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g01671 Pkinase 8.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01671 - - gmx:100818344 977.622