Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01669 ATGTCTCTACACAAGCCGAAGCTGGAAACACCAAGTTCAATTTTTGAAGATGACCCATCAATCAAAACAAAGAGAAAGCCCAAAAGAAAGCTTCTCCGAATCATAATCACCGACCACGACGCCACTGATTCTGATTCCTCCGGCGACGAAGGGAGAGAGAGAAACAGCAACCAAAGAACAACTCGAAGAAAACCAAAAAGAGAAGTCCTTGAAATTAACATGCACCATCCCGTACTGTATTCTTCTCTCTCGTTTTCTTCTCCTTCATCATCATCTTCTTCTCTTGCATGCTCGGAGAAGAACCACAGAAAGTACACTAGACCCAAGAGAACACCAACCTCCTCCGCCACGCGCCACCGCAACAAGTTCCGTGGAGTAAGGCAACGGCCATGGGGAAAGTGGGCGGCTGAGATCCGAGACCCGGCCCAACGGAAACGTCTCTGGTTAGGAACATTTAACTCCGCTGAAGAAGCCGCCGCCGAGTACGACAGAGTTGCTGTGATGCTGAGAGGTTCCGACGCCGTTACCAACTTTCCTGTAACGCCGGAGAAGGTGGAAACTGAAGTACCACCGCCGGTAAATGGCGGAAATGACGGCGGAGCTGGTTATTCCATTTCCGACGCTTTGGCTTCGCCGACGTCTGTTTTAACTTATGACTGTGATTCGACGCCGTTCGACAGTTACCGTTACGGAGATGTGGACGCTTTCGGGTTCCACATTGACGCGCCGTTAAGTTTGCCGGAAGTTAACGGTGCGCTGACGTGTCATCAAAAATTGGAAAAAGAAGAGGCGTTTGAAGAGTTTGATCTCGACGAGTTTATGACGTGGCCGTACTAA 837 0.497 MSLHKPKLETPSSIFEDDPSIKTKRKPKRKLLRIIITDHDATDSDSSGDEGRERNSNQRTTRRKPKREVLEINMHHPVLYSSLSFSSPSSSSSSLACSEKNHRKYTRPKRTPTSSATRHRNKFRGVRQRPWGKWAAEIRDPAQRKRLWLGTFNSAEEAAAEYDRVAVMLRGSDAVTNFPVTPEKVETEVPPPVNGGNDGGAGYSISDALASPTSVLTYDCDSTPFDSYRYGDVDAFGFHIDAPLSLPEVNGALTCHQKLEKEEAFEEFDLDEFMTWPY 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01669 278 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 MobiDBLite consensus disorder prediction 83 122 - -
Vivi7g01669 278 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 191 - -
Vivi7g01669 278 Gene3D AP2/ERF domain 121 181 IPR036955 GO:0003700|GO:0006355
Vivi7g01669 278 MobiDBLite consensus disorder prediction 83 99 - -
Vivi7g01669 278 CDD AP2 122 181 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 MobiDBLite consensus disorder prediction 1 68 - -
Vivi7g01669 278 MobiDBLite consensus disorder prediction 33 68 - -
Vivi7g01669 278 FunFam Ethylene-responsive transcription factor 2 121 180 - -
Vivi7g01669 278 MobiDBLite consensus disorder prediction 103 122 - -
Vivi7g01669 278 SUPERFAMILY DNA-binding domain 122 180 IPR016177 GO:0003677
Vivi7g01669 278 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
Vivi7g01669 278 PIRSF PTI6 1 278 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01669 Vivi-Chr7 74390173 74391921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01669 22 227 AP2-EREBP Transcription Factor Family AT4G27950 42.523 1.57e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi7g01669 AP2 2e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01669 7 74390173 74391921 Vivi7g01669 7 74390173 74391921 ECH