Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01659 ATGGGGGTTGAAGTTTGCATGAATAGACTGTGTAAGGATGGTTCAAGTGGTGAATGGAAGAAAGGGTGGTCTTTGATGTCTGGTGGATTTGCAAAACTCTGCAACAAGTGCGGACTTGCCTATGAGAATTCGGTTTTCTGTGATGTATTCCACCGTCATGAAGCCGGTTGGAGGGAATGCAGCAATTGTAACAAGCCGGTCCACTGTGGATGTATTGTGTCAAGGTCTTTGTTCGAGTACCTTGATTCCGGTGGTGTAGGCTGTGTTAGCTGCATCAAGATTTCCCATTTTTGTCCGGATACTGAAAAATCTAATAGGTTGACTCTATCAACCAAAAACAATGCAAGTGATCGATATGCTGAACGTGCTGCTGGCAAAGGAAACCTTTTGCAGTTGTGTAGAACGGGTGAAGTTGGTGAGTCAAGCCGCTGGCCACATGCTCAAAGAGACGGCATGGTTTCATGCAATGGTCCAAAAAGCGGAGAAGTTAAGTGTCGATTCAACAAAGAGGATCGAGGATATTTAAATGTGATGAAACATTCTAGTCCTTTATCGAGGCTTACTACGTCGGAAAATAATCGGCCAACATGGGAGGAGACTAAAAATAATATGGATGAACTACTTTCGCTGAAGATTTCTCTTTTTCAGCAAGAGCAAAAATCTCACCCTTTATTGACTAATCAAACGAAGAATGGGGTTACGATGAATCTTGAAGCAAATAAAGGTTTGATTTCTCATGAACGCATTGGACGGCCATATGTTGATGTTAAAGGGAAAAGTCAGTTACTTTCTCGATACTGGCCAAGGATTACTAATCAAGAATTGGAGAAGTTGTCTGGCGATTTGAAGTCTACTATAGTGCCATTATTCGAGAAGGTGTTAAGTCCGAGTGATGCAGGTCGAATCGGTCGCCTTGTTCTCCCAAAAGCGTGTGCTGAGGCTTTTCTTCCTCCGATTTCGCAATCAGAAGGTGTTCCATTACAGTTCCAAGATTTTAAGGGGAACGAGTGGACTTTTCAGTTCAGGTTTTGGCCTAATAATAACAGTAGGATGTATGTATTGGAGGGCGTGACTCCTTGCATACAGGCCTTGCAATTAAATGCCGGCGATACTGTGACATTTAGTCGGATAGAACCTGGAGAAAAATTTGTACTCGGTTTTAGAAGGGCTACGAATTCTATTGATACACAGGATGGCTCTCCATCTGCTCATTCGAACGGAATTTTGACGAAGGGTACAAACTTTTCTAGTGGAACTAAGATTCTGAACTCATTAGGTAGTTTTTCTGATCTTTTTCAAAAAACGAAAGGTAACGGGGAACCGAACTTAAATGGACATTCAGAACATCTGCGTTTGGGTAACGGAACTTATGATTGGCTTAAAACCGCGCCTAGTGATGCGGTGATAAACCCCGAGCCATTGCAGCAACTGGTTTCTGTTTCAGAAAAGAAAAAGACTCGTAACATTGGGCCGAAAAATAAGAGGTTGCACATTCGTAGTGAAGATTCTATAGAGTTGAGACTTACGTGGGAAGAAGCACAATACTTTCTTTGTCCTCCGCCTAGTGTCAAGCCAAATCTCGTGACAATCGAGGGCCTGATATTCGAAGAATATGATGAACCACCGGTTTTTGGGAAGAGAACTATATCCGATACTAGTCAATCTTCTGCATCAGAGCAGCTCAGTCCAAAGGAAAAAGAAAATCTTCTGCGAACCAGAAAAGTTTCTAAAAAGAGAAAAATTGGCGAAAAGAGTAAGTCGATTGAACAAGACAAGCTTTCAAGCCTAGACGCTCTTGCAAGTGCAGCAATTTTAGGCGACAATCTTGCTGAACTCGGTGAGTCATCATCAGCTGGAGCCACCACCAAACATCCGAGGCATCGTCCTGGATGCAGTTGCATCGTGTGCATTCAACCACCAAGCGGACAAGGAAAACATAAGCCAACATGCACCTGCGTCCCCTGCGAGACTGTGAAGCGCCGGTTCAATACCTATATGATGCGTAGGAAGAAAAACCGATCAGAATCTTCTGAAGCAGCCGCTTTCCAAAACGATCAAATGAATCATAGAGATGGAGCCGGTACCAGTAGCGGTGGTGCATCAGGACAAGATACAAGCCACTCATCGGACGAGGGAAGCCTAAATGAAGGTCAGCTTGAGGGAAGCCTGAATGAAGGTCAGCTTGAGGTTGTTGAGGCGAATGCGGCGGCACAATTAGATCTGAATTGTCATCCCAATCATGAAGATATGGAAATGGATACACATAACAAGACAGATTATGACTAA 2286 0.4357 MGVEVCMNRLCKDGSSGEWKKGWSLMSGGFAKLCNKCGLAYENSVFCDVFHRHEAGWRECSNCNKPVHCGCIVSRSLFEYLDSGGVGCVSCIKISHFCPDTEKSNRLTLSTKNNASDRYAERAAGKGNLLQLCRTGEVGESSRWPHAQRDGMVSCNGPKSGEVKCRFNKEDRGYLNVMKHSSPLSRLTTSENNRPTWEETKNNMDELLSLKISLFQQEQKSHPLLTNQTKNGVTMNLEANKGLISHERIGRPYVDVKGKSQLLSRYWPRITNQELEKLSGDLKSTIVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPPISQSEGVPLQFQDFKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQALQLNAGDTVTFSRIEPGEKFVLGFRRATNSIDTQDGSPSAHSNGILTKGTNFSSGTKILNSLGSFSDLFQKTKGNGEPNLNGHSEHLRLGNGTYDWLKTAPSDAVINPEPLQQLVSVSEKKKTRNIGPKNKRLHIRSEDSIELRLTWEEAQYFLCPPPSVKPNLVTIEGLIFEEYDEPPVFGKRTISDTSQSSASEQLSPKEKENLLRTRKVSKKRKIGEKSKSIEQDKLSSLDALASAAILGDNLAELGESSSAGATTKHPRHRPGCSCIVCIQPPSGQGKHKPTCTCVPCETVKRRFNTYMMRRKKNRSESSEAAAFQNDQMNHRDGAGTSSGGASGQDTSHSSDEGSLNEGQLEGSLNEGQLEVVEANAAAQLDLNCHPNHEDMEMDTHNKTDYD 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01659 761 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 560 - -
Vivi7g01659 761 SUPERFAMILY DNA-binding pseudobarrel domain 287 392 IPR015300 -
Vivi7g01659 761 MobiDBLite consensus disorder prediction 547 563 - -
Vivi7g01659 761 MobiDBLite consensus disorder prediction 677 722 - -
Vivi7g01659 761 FunFam B3 domain-containing transcription repressor VAL1 268 395 - -
Vivi7g01659 761 MobiDBLite consensus disorder prediction 744 761 - -
Vivi7g01659 761 CDD B3_DNA 288 389 IPR003340 GO:0003677
Vivi7g01659 761 MobiDBLite consensus disorder prediction 545 588 - -
Vivi7g01659 761 MobiDBLite consensus disorder prediction 668 761 - -
Vivi7g01659 761 Gene3D - 268 395 IPR015300 -
Vivi7g01659 761 SMART B3_2 290 391 IPR003340 GO:0003677
Vivi7g01659 761 ProSiteProfiles B3 DNA-binding domain profile. 290 391 IPR003340 GO:0003677
Vivi7g01659 761 Pfam B3 DNA binding domain 290 390 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01659 Vivi-Chr7 74148727 74153664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01659 3 713 B3 DNA Binding Superfamily AT4G32010 42.408 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi7g01659 B3 7.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01659 K09287 - psat:127118438 1364.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01659 7 74148727 74153664 Vivi7g01659 7 74148727 74153664 ECH
Vivi3g04842 3 91523374 91529296 Vivi7g01659 7 74148727 74153664 PCT