Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01656 ATGCAACACTCATCTTCAAACCCTAATTCCAGTTCCATCCCCAATCCTCACAATGCAACCACCGCGTCCAAATTTCCCCCACCGCCACCTCCATCCACGGCAACCACAACCGCCGCCTGCAAACCCTCCATGTTCCCGCGCCCCGGCGGAAATGGCGGCCCCCTCCACCGGAGAGCTCACTCCGAGGTCAGTTTCCGGTTGCCGGACGACATGATGGACTTGTCCCCGTCCGATCCGTTCACCGGCGGATCGTCTACGGCGAGCCTAGATGAGATCGGATCCGAGGATGACCTGTTCTCGACATACATTGACATGGATAAGCTCGGAGGTTCAAACGATTTGGGAGACGGTGGAGTAGATCCGGTGAGGAATGATGAGCAGGAGAAGAACCAAGGGAGGTCGAGGCATAGGCATAGTAGTTCGGTGGATGGTTCTTCGTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAGCTGGCTGAGCTTTGGTCTATTGATCCCAAGCGGGCGAAAAGAATACTTGCGAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCTCGCTATATACATGAACTAGAGCGCAAAGTTCAGACCCTACAGACTGAAGCTACAACTCTTTCTGCCCAACTGACATTATACCAGAGAGACACAACAGGTCTGAGTAATGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTCCGTGATGCTCTTAATGATGCATTAAAGAAAGAAGTTGAGAGACTGAAGGTTGCTACTGGAGATATAATGAGCCACACTGAATCTTTCAATCTTGGTATGCGCCAGATGCCATTTACAGAATCAAATTTCCTTCCCATTTCACCACAACCAGGTCATTCGGGTCACCGTAACATCCAGTTGCCACTATTTGGTCACTCCCCATCTAGTATGGCAACTCATCAACTGCAACAAACAAATTCTCATTCATTTTCAGAATTATTGCAAAGTGATCAGATTGGTCGTTTTCAAGGACTTGATATTAGCAGCAAAGGAACAACCGTTGTTAAGTCTGAAGATCCCTCTCTTTCTGCGAGTGAGAGTAGCACTACATTTTGA 1113 0.4861 MQHSSSNPNSSSIPNPHNATTASKFPPPPPPSTATTTAACKPSMFPRPGGNGGPLHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDMDKLGGSNDLGDGGVDPVRNDEQEKNQGRSRHRHSSSVDGSSSFGEIMDGKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSNENTELKLRLQAMEQQAHLRDALNDALKKEVERLKVATGDIMSHTESFNLGMRQMPFTESNFLPISPQPGHSGHRNIQLPLFGHSPSSMATHQLQQTNSHSFSELLQSDQIGRFQGLDISSKGTTVVKSEDPSLSASESSTTF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01656 370 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g01656 370 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Vivi7g01656 370 MobiDBLite consensus disorder prediction 21 35 - -
Vivi7g01656 370 CDD bZIP_plant_RF2 173 222 IPR044759 GO:0003700|GO:0006355
Vivi7g01656 370 MobiDBLite consensus disorder prediction 1 93 - -
Vivi7g01656 370 FunFam probable transcription factor PosF21 171 224 - -
Vivi7g01656 370 Gene3D - 171 224 - -
Vivi7g01656 370 Coils Coil 223 243 - -
Vivi7g01656 370 MobiDBLite consensus disorder prediction 110 156 - -
Vivi7g01656 370 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 20 334 - -
Vivi7g01656 370 SUPERFAMILY Leucine zipper domain 172 223 IPR046347 GO:0003700|GO:0006355
Vivi7g01656 370 Pfam bZIP transcription factor 172 226 IPR004827 GO:0003700|GO:0006355
Vivi7g01656 370 Coils Coil 188 215 - -
Vivi7g01656 370 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700|GO:0006355
Vivi7g01656 370 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01656 Vivi-Chr7 74132439 74135340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01656 27 370 bZIP Transcription Factor Family AT2G40620 50.923 3.46e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g01656 bZIP_1 8.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01656 - - vra:106763153 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01656 7 74132439 74135340 Vivi7g01656 7 74132439 74135340 ECH
Vivi3g04863 3 92298204 92301133 Vivi7g01656 7 74132439 74135340 PCT