Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01646 ATGTTTTGTAAGAGAGAGAAGAACATGGAGGATTTTAAGGAAGAGAAATGTTATGTTGAAACTGATCCAACTGGTCGTTATGGCAGGTTTGGAGATGTACTTGGGAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTGCTTGGAATAGAGGTAGCATGGAACCAAGTTAGGCTCAATGAGGTACTTAATACGCCGGACGATTTGCAGCGGCTTTACTCGGAGGTTCATCTCCTGAGCACGCTCAAGCATCGGTCGATTATGCGATTCTACACGTCTTGGATTGATATTGATAACAAGGCTTTCAATTTCATTACAGAAATGTTCACATCAGGATCACTAAGAGAATACCGGAAGAAGTATAAGCGAGTAAGCGTACAAGCAATAAAGAGTTGGGCGCGGCAAATCTTACATGGACTAGTTTTTCTACATGAACATGATCCACCTGTTATCCATAGGGACCTGAAATGTGATAACATATTTGTGAATGGCCATCTTGGACAAGTGAAAATTGGTGATCTTGGACTAGCTGCAATTCTCCAAGGCTCTCAATCAGCTCATAGTGTTATAGGTACACCGGAGTTCATGGCACCGGAAATGTACGAGGAAGAATACAATGAACTTGCTGATGTTTACTCATTTGGCATGTGTGTGTTGGAAATGCTCACTTCTGATTATCCGTATAGCGAATGTACTAATCCAGCGCAGATTTACAAGAAAGTGACATCGGGGAAGCTGCCAATGTCGTTTTTCTGCATTGAAGACACGGAAGCACGAAGATTCATTGGAAAATGTTTAGAACCTGCAGCAAAGAGACCGTCTGCGAAAGAGCTGTTGCTTGAGCCCTTTCTTTTGGCCGATGATTTGTCATCGGCTAAGAAGTTGGCAATTCAGAAACCATTTTTGAATGACAGTGAGATGGAGAAACTTCGACTGAGTGATGAGTTTCCTAGAACTGAAATGAAAGTAATCGGAAAGTTGAATCCCGAAGACGAAACTATCTTTCTCAAAGTGCAAATTTCTGATAAGAATTGTTCTGTTAGAAATGTATATTTTCCATTTGATATTCACACTGACACACCAATTGATGTTGCAATGGAGATGGTAAAAGAATTGGAGATTTCTGATTGGGATCCTTATGATATTGCAAATATGATCAATAGAGAGATATCTGCTCTTCTGCCATATAGATGGAAAAATGAAAATTCAGATTCCTTCCAAACATTCAGTTACCAAAACGACGATGTCGAGGAACATCGTCTTCATTTCCGCTCAATCTCTTCTTGTTCGTCGTTACAAGATTCAATACCGGATTCAGCCTGTAAAGCTGAGGAAATATCGCGTGGTTATTATTTGCTTCATGATGATTTGCATGATGATAACAGTTCAAGATGCTCTTCACAAGGGACATATTCAAACTGGAACTACTATTCTATGGATGATCATGAACACAATGTACCTTCGATCCGAAAAGATTATAACCTTCCCATCATAAAGAGTCACAAGGGCACAAGATTTTCACCTGGTGAAGAGTTGAGCAATTGCAACCATGGTAAAATTTTAGGAGGATCACAAAATCCCTCACCTAGTAAAAATAAGATGATGATGGAAAATCGAAAACTGACACGGAACAGGTCATTGATCGATACGCGGAGCCAATTGTTACACAGATCATTGGTTGATGAATTGAACAAAAGAAGACAATTCAAGACTGTTGGTGCTGTGGAGAATATTGGATTTCAGTCACCTTATGATGATTCTATATAA 1773 0.3976 MFCKREKNMEDFKEEKCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHRSIMRFYTSWIDIDNKAFNFITEMFTSGSLREYRKKYKRVSVQAIKSWARQILHGLVFLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQSAHSVIGTPEFMAPEMYEEEYNELADVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPMSFFCIEDTEARRFIGKCLEPAAKRPSAKELLLEPFLLADDLSSAKKLAIQKPFLNDSEMEKLRLSDEFPRTEMKVIGKLNPEDETIFLKVQISDKNCSVRNVYFPFDIHTDTPIDVAMEMVKELEISDWDPYDIANMINREISALLPYRWKNENSDSFQTFSYQNDDVEEHRLHFRSISSCSSLQDSIPDSACKAEEISRGYYLLHDDLHDDNSSRCSSQGTYSNWNYYSMDDHEHNVPSIRKDYNLPIIKSHKGTRFSPGEELSNCNHGKILGGSQNPSPSKNKMMMENRKLTRNRSLIDTRSQLLHRSLVDELNKRRQFKTVGAVENIGFQSPYDDSI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01646 590 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01646 590 CDD STKc_WNK 26 286 - -
Vivi7g01646 590 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Vivi7g01646 590 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Vivi7g01646 590 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Vivi7g01646 590 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01646 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Vivi7g01646 590 SUPERFAMILY Protein kinase-like (PK-like) 29 287 IPR011009 -
Vivi7g01646 590 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Vivi7g01646 590 MobiDBLite consensus disorder prediction 508 535 - -
Vivi7g01646 590 MobiDBLite consensus disorder prediction 520 535 - -
Vivi7g01646 590 Gene3D - 325 404 - -
Vivi7g01646 590 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01646 590 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01646 Vivi-Chr7 74065451 74068923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01646 18 586 MAP Kinase Kinase Kinase AT5G58350 58.435 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi7g01646 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01646 K08867 - gmx:100272203 897.886