Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01645 ATGGGAAATAACAAGTTCAAATTTTCAGATATGATACCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAAATCATCAAGGAAAAGAAATGGTTCATCACAATATATGAAGAACAAAGTAATAACTTCACCAACATCAACATCTCAAAGGTCACAAAATTCAAGGTATTCTTCACATTATTTCTCAAATGAACCAATGAGGGTTGGTAAGTTATTTAACAAACCAAATCATGTCAAAGATTTGAACTTTCCATCCAATGATTCACCAAGAATGTCTTCAAAGAGAAGGGTTGGAAGAAAAACTATTTACAAGCCTTCTCAATCTTGTCAACCATTTGAACAAGTTCAAGTTCAAGTTCAATCACAAGAACATGATTTGTCTTCAATTGAAAATTCTTCTTGTGAGTCTTATCATAATCAATGTGTTTCTTCTGAATCCGAATTTTGTGATAGCTTTTCGGTTCCGGATTTGCTTAATTGTAGTTGTAGAGTTAGCTCTTCAACTAATGATATCATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAACACTTAGATGGTTTTGAATCTTTTGATGCATTTTCGCAACTCGGTTTAGCTCCAATATTGACAAAGCAAGTGAAGTTTGACGATGATAAAATCGTCGAGGAGATCGAATCTCGATGCTCGATCGAATCGGACGAGCGATTTTCGGACGAGCGAAAAATCGGCCATTCTTTCTCCTCTATCAAAGTTAATCAAAGAAGGAGGAAAAAAAGTCAAATAGGTAAAAGAGCTTCTCCTAATTCTTCTCAAGGTATAAGGCTTAGAATGAATTCTCCAAAACTTGGTAATAGAAAAATTCAAGGTTGTGGAAGAAAGAGTGTTACAAGGAATGAGGGAGGGTTTGTAGATGGATTTGCTGTTGTTAAGTCATCAATTGATCCAATAAGTGATTTCAAGGAATCAATGGTGGAGATGATTGTTGAGAATAATATAAGAGGGTCAAAGGATTTGGAGAATTTACTTGCTTGCTATCTTTCACTTAATTCAAGTGAATATCATGATCTTATTGTTAAAGCTTTTGAGCAAATTTGGTATGATATGGCTCAACTTAGAATGTAA 1113 0.3387 MGNNKFKFSDMIPNAWFYKLKDMSKSSRKRNGSSQYMKNKVITSPTSTSQRSQNSRYSSHYFSNEPMRVGKLFNKPNHVKDLNFPSNDSPRMSSKRRVGRKTIYKPSQSCQPFEQVQVQVQSQEHDLSSIENSSCESYHNQCVSSESEFCDSFSVPDLLNCSCRVSSSTNDIIIDMNNESFQGNSKHLDGFESFDAFSQLGLAPILTKQVKFDDDKIVEEIESRCSIESDERFSDERKIGHSFSSIKVNQRRRKKSQIGKRASPNSSQGIRLRMNSPKLGNRKIQGCGRKSVTRNEGGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAQLRM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01645 370 Pfam Transcriptional repressor, ovate 309 365 IPR006458 -
Vivi7g01645 370 MobiDBLite consensus disorder prediction 248 279 - -
Vivi7g01645 370 NCBIfam uncharacterized plant-specific domain TIGR01568 303 365 IPR006458 -
Vivi7g01645 370 MobiDBLite consensus disorder prediction 27 57 - -
Vivi7g01645 370 MobiDBLite consensus disorder prediction 260 274 - -
Vivi7g01645 370 MobiDBLite consensus disorder prediction 76 97 - -
Vivi7g01645 370 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Vivi7g01645 370 ProSiteProfiles OVATE domain profile. 305 364 IPR006458 -
Vivi7g01645 370 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 119 365 IPR038933 GO:0045892
Vivi7g01645 370 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01645 Vivi-Chr7 74060387 74061768 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi7g01645 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01645 - - cam:101489571 419.083