Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01639 ATGCCAGACACCGAACAGCCGCCGTCAACGGCGGAAACCACCACGAAGCTCTTCGGGAAATACGAACTCGGCAAGCTCCTAGGCTGCGGCGCGTTCGCCAAAGTTTACCACGCGCGGAACGTCGAAAACGGACAAAGCGTGGCCGTGAAAGTAATCAACAAGAAGAAAATCAACGCCATAGGACTCGCCGGGAACGTGAAACGCGAAATCTCAATCATGAGTCGTCTCTGTCACCCTAACATCGTTAGGCTTCACGAAGTTCTCGCTACCAAAACGAAAATCTACTTCATCATGGAGTTCGCTAAAGGCGGCGAACTCTTCGCGAAAATCTCCAGTAGAGGCCGTTTCAGCGAAGATCTATCGCGGCGGCTTTTTCAACAACTCATCTCCGCCGTCGGTTACTGCCATAACCGTAACATCTTCCACCGTGACTTGAAACCTGAAAATCTCTTGCTCGATGATAAGGGGAATTTGAAGGTTACGGATTTTGGATTAAGTGCGGTGAAAGAGCAGATTCGTGTGGACGGGATGTTACACACGCTTTGTGGAACACCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAGAGGTTACGACGGAGCTAAGGTGGATATTTGGTCTTGTGGTGTTATTCTGTTTGTTCTCGCTGCTGCTTATCTTCCGTTCAACGATCCGAATTTGATGGCGATGTATAGGAAGATTTACACCGGGGAATTTAAGTGTCCGCGGTGGTTTTCACCGGATCTACGGCGGTTTTTGTCGCGGTTGATGGATACGAATCCGGAGACGAGGATAACTATTGATGAGATTACTAGAGATCCTTGGTTTAGGAAAGGGTATAAGGAGGTCAAGATTTATGAAGAGGGTTATGACTTTGGGGAGAAGGTTGGTGTTAGTGTTAGGGGTGAGGAAGAGGATAATAAACCGGTGGATTTGAATGCATTTGATATAATATCGTTTTTCTCGTCTGGATTGAATCTATCTAGGTTGATTGGAGATGGGATCGGTGAAGGGGAGAGGTTTATGTTGAAGGAGTTACCAGGGAGGGTTGTGGAGAGGGCGGAGGCGGCGGCGAAGGCGGAGGGGTTAGTGGTGAGGAAGAAGAAGGAATGTGGGGTGGAGATTGAGGGGCAAAATGGGGATTTGGTGATTGGGGTTGAGGTTTACCGGTTAACGGCTGAGCTGGTTGTGGTTGAGGTGAAGAGGTTTGGTGGGGACGCGGTTGCTTTTGAGAATGTGTGGAGGGAAAAGTTGAGGCCCCATTTGTGTGATGATGCAACGACGTCGCATCAGGAGCCAAGTACCTCTCACGCGGTTTCTGCTGACTCAGCTATTTGA 1338 0.4933 MPDTEQPPSTAETTTKLFGKYELGKLLGCGAFAKVYHARNVENGQSVAVKVINKKKINAIGLAGNVKREISIMSRLCHPNIVRLHEVLATKTKIYFIMEFAKGGELFAKISSRGRFSEDLSRRLFQQLISAVGYCHNRNIFHRDLKPENLLLDDKGNLKVTDFGLSAVKEQIRVDGMLHTLCGTPAYVAPEILAKRGYDGAKVDIWSCGVILFVLAAAYLPFNDPNLMAMYRKIYTGEFKCPRWFSPDLRRFLSRLMDTNPETRITIDEITRDPWFRKGYKEVKIYEEGYDFGEKVGVSVRGEEEDNKPVDLNAFDIISFFSSGLNLSRLIGDGIGEGERFMLKELPGRVVERAEAAAKAEGLVVRKKKECGVEIEGQNGDLVIGVEVYRLTAELVVVEVKRFGGDAVAFENVWREKLRPHLCDDATTSHQEPSTSHAVSADSAI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01639 445 CDD CIPK_C 313 423 - -
Vivi7g01639 445 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01639 445 Gene3D Kinase associated domain 1, KA1 310 425 - -
Vivi7g01639 445 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Vivi7g01639 445 Gene3D Transferase(Phosphotransferase) domain 1 11 309 - -
Vivi7g01639 445 SUPERFAMILY Protein kinase-like (PK-like) 17 285 IPR011009 -
Vivi7g01639 445 FunFam Non-specific serine/threonine protein kinase 11 308 - -
Vivi7g01639 445 ProSiteProfiles NAF domain profile. 307 332 IPR018451 GO:0007165
Vivi7g01639 445 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01639 445 MobiDBLite consensus disorder prediction 427 445 - -
Vivi7g01639 445 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01639 445 MobiDBLite consensus disorder prediction 425 445 - -
Vivi7g01639 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Vivi7g01639 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 409 - -
Vivi7g01639 445 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Vivi7g01639 445 Pfam NAF domain 309 367 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01639 Vivi-Chr7 73975119 73977142 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01639 1 430 CBL-interacting serine-threonine protein kinases AT2G30360 60.000 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi7g01639 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01639 - - gmx:100815088 585.489