Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01632 ATGTCCAGAGACAGATTAGATGATATAGCAAAGATCAACTTATCAGAAGGAGAAGCATCTTCTCAAATGGGAAGGAAGAATTTCTATGGTCCAACTTCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGGTGCGCTGAGGAATGTCCTTTCTCTCCATACTTTTCACCTCATGAGCCTCAAAAATTTGCAGCTGTTCATAAAGTATTTGGTGCTAGCAATGTCTCAAAGTTGCTATTGGAGGTACCTGAAGGACAAAGAGCAGATGCAGCAAATAGTATGGTTTATGAAGCAAATTTGAGGTTAAGAGATCCAGTATATGGCTGCATGGGTGCAATATCATCATTACAACAGCAAGTTCAATCATTACAAGCAGAACTACATGCAATTAGAACTGAGATACTAAACTACAAATATAGAGAAGCTGCTAGTAACTTTATCTCTTCTCAAGTATCAATGCCTACAAATGCAAACTCACAACAAGATCTTCCTCAATCTATTGCTCTTCCAACTTTAGCTCCTCCATCTCCAGCTCTTCCTCCTCCACAAAAAGCATCGGCTTCTCAATCGATTATCCTTTCGTCGTTTTCTTCGTCTTCGGCTTCGTCGGTTTACACTCCATCTAAAACAACAATGAGTCATGGATCTATTTCTAGTGAAAATATTCCTTACTTTATTTAG 705 0.3915 MSRDRLDDIAKINLSEGEASSQMGRKNFYGPTSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLLEVPEGQRADAANSMVYEANLRLRDPVYGCMGAISSLQQQVQSLQAELHAIRTEILNYKYREAASNFISSQVSMPTNANSQQDLPQSIALPTLAPPSPALPPPQKASASQSIILSSFSSSSASSVYTPSKTTMSHGSISSENIPYFI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01632 234 Pfam Lateral organ boundaries (LOB) domain 42 138 IPR004883 -
Vivi7g01632 234 Coils Coil 121 141 - -
Vivi7g01632 234 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Vivi7g01632 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01632 Vivi-Chr7 73892344 73894098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01632 23 152 AS2 family AT2G30340 77.692 7.78e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g01632 LOB 3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01632 - - gmx:100813489 294.664