Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01631 ATGTTTGGATGTCCAGAGACAGAAAGATTAGATGATATAGCAAAGATCAACTTATCAGAAGGAGAAGCATCTTCTCAAATGGGAAGGAAGAATTTCTATGGTCCAACTTCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGGTGCGCTGAGGAATGTCCTTTCTCTCCATACTTTTCACCTCATGAGCCTCAAAAATTTGCAGCTGTTCATAAAGTATTTGGTGCTAGCAATGTCTCAAAGTTGCTATTGGAGGTACCTGAAGGACAAAGAGCAGATGCAGCAAATAGTATGGTTTATGAAGCAAATTTGAGGTTAAGAGATCCAGTATATGGCTGCATGGGTGCAATATCATCATTACAACAGCAAGTTCAATCATTACAAGCAGAACTACATGCAATTAGAACTGAGATACTAAACTACAAATATAGAGAAGCTGCTAGTAACTTTATCTCTTCTCAAGTATCAATGCCTACAAATGCAAACTCACAACAAGATCTTCCTCAATCTATTGCTCTTCCAACTTTAGCTCCTCCATCTCCAGCTCTTCCTCCTCCACAAAAAGCATCGGCTTCTCAATCGATTATCCTTTCGTCGTTTTCTTCGTCTTCGGCTTCGTCGGTTTACACTCCATCTAAAACAACAATGAGTCATGGATCTATTTCTAGTGAAAATATTCCTTACTTTATTTAG 717 0.3905 MFGCPETERLDDIAKINLSEGEASSQMGRKNFYGPTSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLLEVPEGQRADAANSMVYEANLRLRDPVYGCMGAISSLQQQVQSLQAELHAIRTEILNYKYREAASNFISSQVSMPTNANSQQDLPQSIALPTLAPPSPALPPPQKASASQSIILSSFSSSSASSVYTPSKTTMSHGSISSENIPYFI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01631 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 42 192 - -
Vivi7g01631 238 Coils Coil 125 145 - -
Vivi7g01631 238 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
Vivi7g01631 238 Pfam Lateral organ boundaries (LOB) domain 46 142 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01631 Vivi-Chr7 73892344 73894101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01631 27 156 AS2 family AT2G30340 77.692 1.39e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g01631 LOB 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01631 - - gmx:100813489 305.064