Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01587 ATGGCTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCAGCTATTGTTGGACTGCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATCTCTTGAAGATTCTTCTTTACTGCATTTTCAGTTTCTTCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTGGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAAAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCCTTTTCTTCAATAGATGCTGGAGCAAATAATCCGCACTCTGATCTCCAAAATGGAAATTCGGTGGTTCTTTCTATAGCTTCTCTACAACTCACCAGTACTGATACTGCTAGTGCTACTAGCAGTGCCAATAACAGTAGCATCGGTTCACCACAATTGGTGATCACCGCTGATATTAGTAATATGATGGAACAACTTCAGACATTTGTAACGGAGCTTCGGCGTGAAAATTCAAATTTCATTCAAATGGTGTTGGATTATGTAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGATACTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGATGAGCTCTGGATTTGAGAAAGATTTTTCCGATGTGTACATCAATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGATTGTTCGGGTTACAGAAGCTCAGCATCGAGGACGTTCACAATATGCCATGGAACGTCCTCGAAGCCCAAATTGAGAAATGGATTAAAACTTTCAATATCACTCTGAAGATACTCTTTCCTGGCGAGCGACGAATCTGTGACCGCATTTTTTTCGGATTCCCATCTGCAGCTGATTTTTCCTTCGTGGAGATTTGCAGGGAAACCACCGTTCAGTTGTTGAGTTTTGCTGAATCCGTCGCTTCTGGAAGTCATTCCCCAGACCGTTTGTTTAAAATGCTGGAGGTGTTGGAAACACTGCGTGACTTAATTCCAGAAATTGAGTCGTTCTTTTGTGATGAATACAGTGTGTCTCTAAGGAATGAAGCAAACACCACACGGAAGAAATTGGAAGATGCAATCAGAGACATTTTCATTCAATTGGAGGAATTTTACAGGCAAGAGCATAGGTATCTGGAGTCATTGGAGAGCAATTTAAATGCCAGATCCAAATTCTACGATGGCTCTTTTTCAGGGGATATTTTCTTGATGAACAATGGCACGTACATAATCCCAATTGCAAAAGATAATGAATTAGGATCCCTTTTGGAGAATGATTGGATCCGACAATATGCTTGGAAAGTTTTGCACTACAATGGACAAGATAACATGAGCACTATCTCACCCGAATTAACCCATGAGGTGAATGTGAAAGATTCGGAAGCATTCCCCTGCCAACCGCGAGTAAGACGCAGGAAAACAACTCAGAATATGAGAACATTAGTGATATCTCCTACACAACAGTTTGGAAGCACATATCAAATACTGTATAAAATGCTTATACATCAAGACGGGTTTACATGGAAATTATACGGAACAAAATTGGACTCAAGACGTCATGGGTCGACCCTGGAAGAGGAGATTGGCTTCAAATATCCTTGGAGTATCTACAGGTGTTACCACATGAAGCAACGTGCGTGTCGAGCCAGAAAGAGTATACAACAACTTGGTGAGAATCCAAACGTGTTTGAAATAATATACTATCATGGACATTCCTGCAACAGTCCCTTAATAAGACCAGCATCACAATCAGGCACACCAGCCGAATCCATAAACACTATACATGGAAAAGCTAGCTGGTCCTGCCGACAGTGGGTATCATCCTATGATGGAAAGCGTCGTATGCTATCTTCTTTCTGTCATTAA 1947 0.4104 MAGAARSVEICRLCLSYCWTALLCSKLFLQLSLWRLESLEDSSLLHFQFLHQPHDFLCKIITTLHKSSVQSSYSISCTGNHICLFLFLRQKGFSYSLIILRSSFSSIDAGANNPHSDLQNGNSVVLSIASLQLTSTDTASATSSANNSSIGSPQLVITADISNMMEQLQTFVTELRRENSNFIQMVLDYVKKYVEEYSELVVTDTNFMMDALKPETIKGLEETAKVMMSSGFEKDFSDVYINCRRECLNECLMHRLFGLQKLSIEDVHNMPWNVLEAQIEKWIKTFNITLKILFPGERRICDRIFFGFPSAADFSFVEICRETTVQLLSFAESVASGSHSPDRLFKMLEVLETLRDLIPEIESFFCDEYSVSLRNEANTTRKKLEDAIRDIFIQLEEFYRQEHRYLESLESNLNARSKFYDGSFSGDIFLMNNGTYIIPIAKDNELGSLLENDWIRQYAWKVLHYNGQDNMSTISPELTHEVNVKDSEAFPCQPRVRRRKTTQNMRTLVISPTQQFGSTYQILYKMLIHQDGFTWKLYGTKLDSRRHGSTLEEEIGFKYPWSIYRCYHMKQRACRARKSIQQLGENPNVFEIIYYHGHSCNSPLIRPASQSGTPAESINTIHGKASWSCRQWVSSYDGKRRMLSSFCH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01587 648 ProSiteProfiles WRKY domain profile. 524 603 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01587 648 Pfam WRKY DNA -binding domain 530 601 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01587 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 404 465 IPR004140 GO:0000145|GO:0006887
Vivi7g01587 648 Gene3D Exocyst complex component Exo70 402 480 - -
Vivi7g01587 648 Gene3D Exocyst complex component Exo70 154 401 - -
Vivi7g01587 648 SMART WRKY_cls 529 602 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01587 648 SUPERFAMILY Cullin repeat-like 163 465 IPR016159 -
Vivi7g01587 648 Gene3D WRKY domain 517 604 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01587 648 Pfam Exo70 exocyst complex subunit 281 402 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi7g01587 648 Pfam Exo70 exocyst complex subunit 406 465 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi7g01587 648 SUPERFAMILY WRKY DNA-binding domain 522 603 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01587 Vivi-Chr7 73307607 73315833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01587 202 466 EXO70 exocyst subunit family AT5G58430 46.082 5.10e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g01587 Exo70 1.4e-26 CL0295