Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01583 ATGCCTATAACAATATCCAATAGACTAATAAAGAAAAAGTTATGGAGAATTTTAGGTTTTTTTTCATGTATCATAGGACTCATTTCATATGCATTCAGCTCTTCTTTCAATCATCTTTTTGGAGAGTGGAACTTCTTCAAAATCGTTATTTACACGGCGGTAAGTTTCATTATCAGTAGCATGATGTTATTAATGAAAAGATTGAAACTTTCAAGGAGATTCTTGATGAAAGCTCATTTGGGTGTTCTTGTTTTGTTGCTAACATCGTTGTACTCTTTCGTATCTGATAATAAAAATTTGAATGGGAAACCGGACCTATTGAGTCTGATTTCGTGTGCAGCCTTTGCTTTAATGTCTTTTTGCTTATCAAGACATATTGATCTTGGTTTTGAATCCGATCTCCTCAATTTCTTCCTTGGAATTTTTACTCTTCAATTGATGAAAGTCAATTTGATGCTATCTATTGTTGCTGCAATCTTCTGTTATTCACTTATGGTTCTTCGTTCTAATTGGGATTCTTGCCGCAAAATTAGAAGTTCGAGAGTGGAAAATGGTAGCGATCATCGTGATGTGGCCATAGAAATTGATGTTTTGGATAATGGTAGCCAACAGAACCAGTCTTTAAGATGGTTCGATCATAAGGATAGGTATAGTTGGAAAAAATATGAAGAGAAATCAGCGAAAGGAAATGAAAACCAGAGAAGCTATTATAAATGTTCATGGCCTAATTGTATGGTGAAGAAAAAAGTTGAGAGAAGAATTGATGGAGATATAATTGAGACACTATGCAAAGGTATGCATAATCATCGCTTGCCTACGACAATAATGAAGAGGAGTTCATCATCTGAATATCTTTATGCACTTTTGCCTTCAGAGACTGGCCCCATTGACTTAACAAATCAATCATTTAGCAGAGATCAATTGGATTTTGATGCTGAGCATGAAAGTTTCTTCCTATCAATATGA 966 0.3458 MPITISNRLIKKKLWRILGFFSCIIGLISYAFSSSFNHLFGEWNFFKIVIYTAVSFIISSMMLLMKRLKLSRRFLMKAHLGVLVLLLTSLYSFVSDNKNLNGKPDLLSLISCAAFALMSFCLSRHIDLGFESDLLNFFLGIFTLQLMKVNLMLSIVAAIFCYSLMVLRSNWDSCRKIRSSRVENGSDHRDVAIEIDVLDNGSQQNQSLRWFDHKDRYSWKKYEEKSAKGNENQRSYYKCSWPNCMVKKKVERRIDGDIIETLCKGMHNHRLPTTIMKRSSSSEYLYALLPSETGPIDLTNQSFSRDQLDFDAEHESFFLSI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01583 321 Gene3D WRKY domain 202 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01583 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 207 294 IPR044810 GO:0003700
Vivi7g01583 321 ProSiteProfiles WRKY domain profile. 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01583 321 SUPERFAMILY WRKY DNA-binding domain 211 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01583 321 Pfam WRKY DNA -binding domain 214 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01583 321 SMART WRKY_cls 213 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01583 Vivi-Chr7 73287339 73289759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01583 176 272 WRKY Transcription Factor Family AT2G03340 45.361 1.68e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g01583 WRKY 5.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01583 - - ccaj:109792596 336.265