Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01575 ATGGCATCTTCATCTAGTAATTTAGATACCAATAATAATAATATTAATAATCTCAATGGTTTGAACTCGTTCAACCATTTTTCCTTCTCATCAACCTCTCACCCTTTCATCATGACCAGTTCTTTCTCTGACCTTTTAGCTTCTCCTCTTGATGACAATGAAAACACTAACAACAACAACAACTCAAGAAGTGATTATGGTGCTCCTAAGTTCAAGTCTACACCTCCTCCTTCTTTGCCTTTGTCACCACCTCTGATTTCTCCTTCTTCGTGTTTTTCTATCCCTCCTGGTTTGAGTCCGGCTGAACTACTTGATTCGCCTGTTTTGTTGAACTCTAACAATGTTTTGCCATCTCCTACAACTGGTGCTTATGCTGCTCATAGCTACAATTGGAAGAACAATTCTGAGGGGAATCAACAACTTGCGAATTTCTCTTTCCAAACCCAACAAGTTCCTGCTGTTACTGCATCCAACACATCTTTTCAATCATCAAACGTTGGAATTCAACAACAACAACAGCAACAGCCATGGAGTTATCAAGAAAGCACAAAGCAAGAAGGTTATTCATCTGGAACCAATATGATGCAAGGTGAAAACAACAACAATGCTGTGCAGATTTATTCTCCGGAGTTTGCCAATGTTCAAATGAACAACACCATGATGAACAACAATGGAATTCAATCTGATTACAACAACTACCAACCGCTGCAACAAGTTCAAACCTTGAGCAAGAAATCGGACGACGGATACAATTGGAGAAAATACGGACAGAAACAAGTGAAAGGAAGTGAGAATCCGAGAAGCTATTACAAATGCACGTACCCGAATTGTCCCACGAAGAAAAAGGTTGAGAGATCGGTCGAGGGACAGATTACTGAGATTGTTTATAAGGGTACTCATAATCATCCTAAGCCTCAATCTACTAGGAAGAACTCGTCGAATGCTCTTGTGATTGTTCCTGCTAATGCCAATGGAAATGAAATGCTTGATCAACCGTATGGTTCATTTGGTAATGGCCAAATGGATTCTGGTGCTACTCCTGAGAATTCGTCGATATCAGTTGGCGGAGATGATGATTTTGAGCAGAGTTCTCATCAGAAGAGTAGATCTGGAGATGATGATGATGAGCCTGATACTAAAAGATGGAAAACTGATGGTGAAAATGAGGGAATTTCTGCACCTGGGAGCAGAACAGTGAGGGAACCTAGAGTTGTTGTTCAGACAACAAGTGACATTGATATTCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGAGCTACTACAAATGTACACACCCAGGTTGTCCAGTGAGGAAACACGTTGAGCGCGCTTCACACGATTTACGGGCTGTGATCACAACCTATGAAGGGAAACACAACCATGATGTCCCTGCTGCTCGCGGAAGCGGAAACAATTCCATAAACCGCCCAACGCCAAACAACCCTTCAAATCCAAACAATGCAGCCACTTCCATTATGCCACTACAGAGTCTAAGGCCACAGCAACCAGCACAATTGTCCCAATCCCTTCCCTTAAACTTAGACATGCTGCAGCCTCAAGGAAACTACGGATTTTCAAGGTTTTCGAATCCAATGGAGTCTTACATGAATCCACAACAACAACAACAGCAACAACATCAACAACAGCATCAGCAACAACATCAGCAACAACAACAACAACAACAAATGTCTGACAATGGTTTTTCCTCTCGAGCCAAGGAGGAACCTAAAGATGACATGTTTTTCGAGTCATTGCTATGCTGA 1797 0.4174 MASSSSNLDTNNNNINNLNGLNSFNHFSFSSTSHPFIMTSSFSDLLASPLDDNENTNNNNNSRSDYGAPKFKSTPPPSLPLSPPLISPSSCFSIPPGLSPAELLDSPVLLNSNNVLPSPTTGAYAAHSYNWKNNSEGNQQLANFSFQTQQVPAVTASNTSFQSSNVGIQQQQQQQPWSYQESTKQEGYSSGTNMMQGENNNNAVQIYSPEFANVQMNNTMMNNNGIQSDYNNYQPLQQVQTLSKKSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSVEGQITEIVYKGTHNHPKPQSTRKNSSNALVIVPANANGNEMLDQPYGSFGNGQMDSGATPENSSISVGGDDDFEQSSHQKSRSGDDDDEPDTKRWKTDGENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNNSINRPTPNNPSNPNNAATSIMPLQSLRPQQPAQLSQSLPLNLDMLQPQGNYGFSRFSNPMESYMNPQQQQQQQHQQQHQQQHQQQQQQQQMSDNGFSSRAKEEPKDDMFFESLLC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01575 598 ProSiteProfiles WRKY domain profile. 410 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 104 498 IPR044810 GO:0003700
Vivi7g01575 598 MobiDBLite consensus disorder prediction 360 387 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 49 68 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 477 502 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 328 401 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 526 598 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 328 359 - -
Vivi7g01575 598 MobiDBLite consensus disorder prediction 49 82 - -
Vivi7g01575 598 ProSiteProfiles WRKY domain profile. 247 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 Pfam WRKY DNA -binding domain 416 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 Pfam WRKY DNA -binding domain 247 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 MobiDBLite consensus disorder prediction 467 502 - -
Vivi7g01575 598 Gene3D WRKY domain 402 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 Gene3D WRKY domain 234 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 MobiDBLite consensus disorder prediction 526 580 - -
Vivi7g01575 598 FunFam WRKY transcription factor 237 306 - -
Vivi7g01575 598 SUPERFAMILY WRKY DNA-binding domain 245 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 FunFam WRKY transcription factor 33 402 468 - -
Vivi7g01575 598 SUPERFAMILY WRKY DNA-binding domain 407 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 SMART WRKY_cls 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01575 598 SMART WRKY_cls 415 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01575 Vivi-Chr7 73153762 73157267 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01575 244 481 WRKY Transcription Factor Family AT2G38470 69.636 2.99e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g01575 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01575 K13424 - gmx:100127385 688.723