Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01570 ATGGAAAACCACAACGATTATGATTCCAACAACGACGAATATGTTACAGAGTCAGATTATGCTCAGGATGACAACAATTCGGTGTCCAGTGCGTTCCAAAGTTCAGATGATGGTGATGGCGATGATATTAGTCACAACGAAGATTTTGGTGAATTAGATGCAACTGTAGGTGATAAAAAGGTGAATATTAAGGCCTTTATTGCTGATGAAATTCGTGCTATAGAATTCGGTACTGTTGAAGAAGCATATGAATTTTATTTTAAGTATGGTAAATGCAAAGGATTTGCCATTAGGAAAAGTGATGTTAGGACAAGAGGGACCGAGGGTGGTAAAATAACAGTAATGAGGCAGCTTGTATGCAATAAACACGGTCTAAGAGAGATGAAACACTTTAGGAGGGCTGATAGGAAAAGAGAACACAGACCTACGACCCGCATGAAATGTCCCGCTAGGCTTCGTGTCCATTACAAAGTCGACAAGAATAGATATGTAGTGAATTTTTTTGAAGAGGCTCACAACTATGAATTAACCCCAACTAGGTTTATACACTTACACCCCATTTATCGTGAAATTTCTGAAGCAGATAGAGCTCAGATTAACGGTCTTTAG 609 0.3892 MENHNDYDSNNDEYVTESDYAQDDNNSVSSAFQSSDDGDGDDISHNEDFGELDATVGDKKVNIKAFIADEIRAIEFGTVEEAYEFYFKYGKCKGFAIRKSDVRTRGTEGGKITVMRQLVCNKHGLREMKHFRRADRKREHRPTTRMKCPARLRVHYKVDKNRYVVNFFEEAHNYELTPTRFIHLHPIYREISEADRAQINGL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01570 202 MobiDBLite consensus disorder prediction 1 49 - -
Vivi7g01570 202 Pfam FAR1 DNA-binding domain 84 177 IPR004330 -
Vivi7g01570 202 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 193 - -
Vivi7g01570 202 MobiDBLite consensus disorder prediction 14 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01570 Vivi-Chr7 72857760 72858368 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi7g01570 FAR1 4.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01570 - - vvo:131619321 407.527