Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01568 ATGACAATAGCGAAAATATTGCAGGAAGAAAAAATTGACAGTTCTCTTGAGTATCTTATTCTAGCCAGTGATGGGCTACGGGACATCGTCATAAAAGAGGAAGCCGTTGCTATGATTAAACCACTTGAGGATGTTGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGGGAGGTAGCGCTGACAACATTACTTGTGTTGTCATTTGTTTCTTGATGAATCAAGTCGGTTCTTCTCTACTAGCTCCGTGTAATAATCCGTCCTAA 270 0.4185 MTIAKILQEEKIDSSLEYLILASDGLRDIVIKEEAVAMIKPLEDVEEAAKRLMQEAYQGGSADNITCVVICFLMNQVGSSLLAPCNNPS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01568 89 PANTHER PROTEIN PHOSPHATASE 8 71 IPR015655 GO:0004722|GO:0006470
Vivi7g01568 89 Gene3D - 4 80 IPR036457 -
Vivi7g01568 89 Pfam Protein phosphatase 2C 9 65 IPR001932 -
Vivi7g01568 89 SUPERFAMILY PP2C-like 11 72 IPR036457 -
Vivi7g01568 89 ProSiteProfiles PPM-type phosphatase domain profile. 1 72 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01568 Vivi-Chr7 72848897 72849601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01568 7 88 PP2C-type Phosphatase Gene Family AT4G31750 65.854 1.62e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01568 K17506 - vvo:131617433 174.096