Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01533 ATGAGATACATTTCATCCCTTAGAAGTCCAAAGAAAGAAGAACATGAAGTACCAGAAGCTATCACTCCAATTCTACCACCAAGGTTCAACAAATCTTACACCAATGAAGATTTCTATCTTTTCGACGAACTCGAAGAGTACTTGAACATTGAAGAAGAAGAAGAAAAGTTATCACCACAAAATACTTGTAATAGTAGTAATGAACAACTTCATTGGGATTTCATGGAATGGGATGAGTTTCCATTTGATGAAGGGAAAGATGATAACATAAGCAAATGCAATTTTGAGGTGAAGAGAGAAAATCACAATGGTGGATTTTGGGAAGTGGATGATGAAAATAGTGTTGCTTTGAAATTGAATTTGAATTTGAATTATCAAGATGTTTTGGATGCATGGTCTGACCGTGGCTCTCCTTGGGCTGATGATTGTTCTCTTTCATTGTCTTCCTCCAATAATTGCTCCTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGAACAAGAAGAGAAGCAAGTGTTCTTAGGTACAAAGAGAAACGTCAAAACAGATTGTTCTCTAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 639 0.3662 MRYISSLRSPKKEEHEVPEAITPILPPRFNKSYTNEDFYLFDELEEYLNIEEEEEKLSPQNTCNSSNEQLHWDFMEWDEFPFDEGKDDNISKCNFEVKRENHNGGFWEVDDENSVALKLNLNLNYQDVLDAWSDRGSPWADDCSLSLSSSNNCSYMGEVPILEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01533 212 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 42 211 - -
Vivi7g01533 212 Pfam CCT motif 169 211 IPR010402 GO:0005515
Vivi7g01533 212 ProSiteProfiles CCT domain profile. 169 211 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01533 Vivi-Chr7 72191446 72192930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01533 103 211 C2C2-CO-like Transcription Factor Family AT1G73870 44.776 1.41e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi7g01533 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01533 - - cam:101495184 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01533 7 72191446 72192930 Vivi7g01533 7 72191446 72192930 ECH