LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g01531	ATGTCGAAGCTAGTTTGCGTCACCGGCGGCAGCGGATGCATCGGTTCCTGGCTCGTCCATCTCCTTCTCCACCGCGGCTACACCGTTCACGCCACCGTCCAAAATCTCAACGATGAGAACGAGACGAAGCATCTAGAAGCTCTCGAAGGAGCCCAAACCAACCTCCGTCTCTTCCAGATCGATCTTCTCAACTACGACACAGTCCTCGCTGCTGTACACGGTTGCGATGGTGTTTTTCACCTCGCTTCGCCGTGCATTGTTGATAAAGTTCATGATCCTCAGAAGGAGCTTCTGGATCCTGCAGTTAAAGGGACTGTGAATGTTCTTACTGCGGCTAAGGAATCAGGGGTGAAGCGCGTGGTTATCACGTCGTCTATCTCGGCGATTACTCCTAGTCCTGATTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGTTGGACTGATACTGAATACTGCAAGAATAAAGAGTTGTGGTATCCATTGTCCAAGACACTGGCAGAGAAAGCCGCTTGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCCGGTACTGTGATGGGCCCTGTTATTCCACCAAGGATTAATGCAAGCATGCTCATGCTTGTTCGACTTCTTGAAGGTTGCACTGAAACATATGAAGATTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCATTGGCACATATTTTGGTATACGAAAACAAGGAAGCTACTGGCAGACATTTGTGTGTTGAAGCTATTTCTCACTACGGTGACTTTGCGGCAAAAGTTGCTGAACTTTATCCAGAATACAATGTGCCTAGGATAAAACAAGATACGCAACCCGGATTGTTGAGAGCAAAGGATGGATCAAAGAAGCTCATGGATTTGGGTTTAGAATTCATTCCAATGGAGCAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGATCCATTTCTTGA	963	0.459	MSKLVCVTGGSGCIGSWLVHLLLHRGYTVHATVQNLNDENETKHLEALEGAQTNLRLFQIDLLNYDTVLAAVHGCDGVFHLASPCIVDKVHDPQKELLDPAVKGTVNVLTAAKESGVKRVVITSSISAITPSPDWPSDVVKREDCWTDTEYCKNKELWYPLSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRINASMLMLVRLLEGCTETYEDYFMGLVHFKDVALAHILVYENKEATGRHLCVEAISHYGDFAAKVAELYPEYNVPRIKQDTQPGLLRAKDGSKKLMDLGLEFIPMEQIIKDAVESLKNKGSIS	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g01531	320	Pfam	NAD dependent epimerase/dehydratase family	5	245	IPR001509	-
	Vivi7g01531	320	FunFam	Cinnamoyl-CoA reductase 1	1	320	-	-
	Vivi7g01531	320	CDD	FR_SDR_e	5	297	-	-
	Vivi7g01531	320	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	4	310	-	-
	Vivi7g01531	320	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1	314	IPR036291	-
	Vivi7g01531	320	Gene3D	-	1	320	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g01531	Vivi-Chr7	72105405	72108135	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi7g01531	3	320	Monolignol Biosynthesis Gene Families	AT5G58490	76.101	0.0	519

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g01531	-		-	gmx:100803241	559.296