Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01530 ATGACAATGAGAAAGTGTTGGTTGGTTGGTGCATTGATAGTTGCGAATCTGATCTATGGAACTTTACTGGTAGTAGAAGGTTACCCTAGTGAGGATCTTGTTGTGAAGCTTCCTGGACAACCTGAAGTTGAATTCAGTCAATATGCTGGTTATGTTGATATTGATGTCAAACATGGCAGAAGCCTCTTTTACTATTTTGTTGAAGCTGATCATGAACCTAACAAAAAATCTCTCACTCTTTGGCTCAATGGAGGTCCGGGGTGTTCTTCCATTGGAGGAGGTGCTTTTACTGAATTGGGTCCCTTTTATCCTACCGGCGATGGACGCGGTTTACGCAAGAATTCAATGTCTTGGAATAGAGCTTCGAATCTCCTCTTTTTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCGAACACAACTTCCGATTACAACATCGGTGACGCCTCCACAGCCAATGATGCGCTTTTGTTCTTGCTTAACTGGTTAGAGAAGTTTCCTACCTACAAATCAAGAGATTTGTTTCTTACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCAAACGCTATTCTTGATTATAATGCTCGTTCAACCGGATACAAATTCAACTTGAAAGGAGTTGCTATTGGAAACCCACTGTTGAATCTGGATCGTGACGCGCAAGCAGTGTATGATTTCTTCTGGTCACACGGAATGATTTCTGATGAAGTTGGCCTTGCCATTACGAAAGATTGTGATTTTGATGATTATACCTTTGCATCTCCTCACAATGTATCTGAATCATGCAACAAAGCCATAGGTGAGGCTGATAAAATTGTCGGCGATTATATAAACAACTATGATGTGCTTCTCGATGTTTGTTATCCGGCCATCGTTGAACAAGAACTGAGATTGAAAAAGATGGCGACTAAAATTAGTTTAGGTGTAGATGTCTGCATGAGTTACGAAAGACGTTTCTACTTCAACCTCCCTGAGGTTCAGAAGTCTCTCCATGCTAACCGTACCAATCTTCCATATCCATGGTCGATGTGCAGTGGTGTTTTAAATTACAGCGATGCAGATCCTAACACGAATATGCTTCCAACTCTTAAACGGATCGTTCAAAACCATATTCCAGTATGGGTTTTCAGCGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTCATTCGTGAGCTAGCCGATGACCTGAAATTCAATATTACAGTCCCATATGGAGCTTGGTTTCACAAAGGCCAGGTTGGAGGTTGGGCAACTGAATATGGAAATCTGTTGACTTTCGCTACGGTTAGAGGAGCAGCACACATGGTACCATATGCACAACCTTCTAGAGCACTGCATCTATTCAGTTCGTTTGTGAATGGTAGGAGATTGCCAAACACGACTCGACCTTCAATCGATTAA 1422 0.4233 MTMRKCWLVGALIVANLIYGTLLVVEGYPSEDLVVKLPGQPEVEFSQYAGYVDIDVKHGRSLFYYFVEADHEPNKKSLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRKNSMSWNRASNLLFLESPAGVGWSYSNTTSDYNIGDASTANDALLFLLNWLEKFPTYKSRDLFLTGESYAGHYIPQLANAILDYNARSTGYKFNLKGVAIGNPLLNLDRDAQAVYDFFWSHGMISDEVGLAITKDCDFDDYTFASPHNVSESCNKAIGEADKIVGDYINNYDVLLDVCYPAIVEQELRLKKMATKISLGVDVCMSYERRFYFNLPEVQKSLHANRTNLPYPWSMCSGVLNYSDADPNTNMLPTLKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELADDLKFNITVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSID 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01530 473 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Vivi7g01530 473 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Vivi7g01530 473 FunFam Carboxypeptidase 362 461 - -
Vivi7g01530 473 Pfam Serine carboxypeptidase 39 461 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 SUPERFAMILY alpha/beta-Hydrolases 24 468 IPR029058 -
Vivi7g01530 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 448 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 FunFam Carboxypeptidase 28 292 - -
Vivi7g01530 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Vivi7g01530 473 Gene3D - 362 461 - -
Vivi7g01530 473 Gene3D - 315 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01530 Vivi-Chr7 72096249 72099288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01530 321 464 Calmodulin-binding Proteins AT2G22960 23.810 3.34e-10 57.4