Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01529 ATGAGAAAGTGTTGGTTGGTTAGTGCATTGATAGTTGTGATCTATGGAACTTTACTGGAAACAGAAGGTTACCGTTACCCTATTGAGGATCTTGTTGTGAAGCTTCCTGGACAACCTGAAGTTGAATTCAGTCAATATGCTGGTTATGTTGATATTGATGTAAAACATGGAAGAAGTCTCTTCTACTATTTTGTTGAAGCTGACCATGAACCTAACAAAAAACCTCTCACTCTTTGGCTCAATGGAGGTCCGGGATGTTCTTCTATTGGAGGAGGTGCTTTTACTGAATTGGGTCCGTTTTATCCGACCGGCGATGGACGCGGTTTACGCAAGAATTCAATGTCTTGGAATAGAGCTTCAAATCTCCTCTTTTTGGAGTCCCCCGCTGGAGTTGGTTGGTCATACTCGAATACAACTTCCGATTATAACATCGGTGACGCTTCCACAGCCAATGATGCGCTTTTGTTCTTGCTTAAATGGTTAGAGAAGTTTCCTACCTACAAATCAAGAGATTTGTTTCTTACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCGAACGCTATTCTTGATTATAATGCTCGTTCAACCGGATACAAATTTAACTTGAAAGGAGTTGCTATTGGAAACCCACTTTTGAATCTAGATCGTGACGCACCAGCAATGTATGATTACTTCTGGTCGCACGGAATGATTTCTGATGAACTTGTTCTTGCCATTACGAAAGAATGCGATTTTGATGATTATACCTTTGCATCTCCGAATAATATATCTGAGTCATGCAACAATGCCATAAGTGATGCTAGCAAAATTGTCAGCGATTATATAAACAACTATGATGTGCTTCTCGATGTTTGTTACCCGGCCATAGTTGAACAAGAACTAAGATTGAAAAAGATGGCTACTAAAATTAGTTTAGGTGTAGATGTCTGCATGAGTTATGAAAGTAGTTTCTACTTCAACCTTCCAGAGGTTCAAAAGGCTCTCCATGCTAACCGTACCAATCTTCCGTATCCATGGTCGATGTGCAGTCGTGTTTTAAATTACAGCCATACAGATCCTAACACTAATATGCTTCCAACTCTCAAACGGATTGTTCAAAACCATATTCCAGTATGGGTTTTCAGTGGAGATCAAGATTCTGTTATGCCATTACTAGGTTCTCGAACACTGATTCGTGAACTAGCTCATGACCTGAAATTCAAGATTACAGTCCCATACGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACCGAATACGGAAACTTGTTGACTTTCGCTACTGTAAGAGGAGCAGCGCACATGGTACCATATGCACAACCTTCTAGAGCACTGCATCTATTCAGTTCCTTTGTGAATGGTAGGAGATTGCCAAACACAACTCGGCCTTCAATCGATTAA 1416 0.4103 MRKCWLVSALIVVIYGTLLETEGYRYPIEDLVVKLPGQPEVEFSQYAGYVDIDVKHGRSLFYYFVEADHEPNKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRKNSMSWNRASNLLFLESPAGVGWSYSNTTSDYNIGDASTANDALLFLLKWLEKFPTYKSRDLFLTGESYAGHYIPQLANAILDYNARSTGYKFNLKGVAIGNPLLNLDRDAPAMYDYFWSHGMISDELVLAITKECDFDDYTFASPNNISESCNNAISDASKIVSDYINNYDVLLDVCYPAIVEQELRLKKMATKISLGVDVCMSYESSFYFNLPEVQKALHANRTNLPYPWSMCSRVLNYSHTDPNTNMLPTLKRIVQNHIPVWVFSGDQDSVMPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSID 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01529 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 FunFam Carboxypeptidase 26 290 - -
Vivi7g01529 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 446 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 FunFam Carboxypeptidase 360 459 - -
Vivi7g01529 471 Pfam Serine carboxypeptidase 37 459 IPR001563 GO:0004185|GO:0006508
Vivi7g01529 471 SUPERFAMILY alpha/beta-Hydrolases 27 466 IPR029058 -
Vivi7g01529 471 Gene3D alpha/beta hydrolase 28 289 IPR029058 -
Vivi7g01529 471 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Vivi7g01529 471 Gene3D - 313 349 - -
Vivi7g01529 471 Gene3D - 360 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01529 Vivi-Chr7 72074035 72076827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01529 318 462 Calmodulin-binding Proteins AT2G22960 24.138 1.56e-09 55.5