Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01524 ATGAGCAGAAAGTTTTCCCCGATTAAGGATCTCAACGATTCAAAAGAAACATGGAGATTGGCCGTTCGAGTTGTTGATTTTTGGAGTGTTATCAACAGCAAGGGTAAGGAGCATCTGGAGATGGTTCTAATGGACGTATCGGGTGATAGGATACAAGTTTTGATTCGTTCTGACCACACACCAAAATGGAAAGCAAGAATACGCGAAAACATGTCTTGCATAATCAACAATGGAACTGTTTATGAAAACGATTTTCAGTGGAAGCTTTGTGATCACGACAAGAAATTTGTGTTTATTGGTGGTACAACTGTTAAGGAAGTTGAAATTCAGAACCTTCCTCCCAAAAGATTTTTTTTCAAAGACTTTAATGATATTCTTGGAGGAAATTGTGAGATGAACCGACTTGAAGATATCATTGGTGTGGTTCAAGAAATCAACAATTTTCAATACAACAATTCTGGAAAAAAATCATTTGTTTCACTGAGTCTTAAAGACTTGAAAGGAGTCATTGTTAACTGCACATTATGGGAGAGCTACGGAACAAAATTTTTGGACTTCTACCACGACGAAAAAAACAGTGGTGCTATTGTAATAATACTAACTCATGCAATGATAAAGGAATCACAAGTCTCAAATGGTTGGAGTGGATCTAAGTTGCTTATTAACGAAGACATTCCAGAGATAACTGAGTATTTATCAAAGTTACCGTCAAATGAGCAGACTGAAAAGCCTTCGCAGTCTTCGAAGGGAATGTCTCTTTGGTCTGGTGCCTCTCAATTCACCCCAGTCGAAAGTTTCGTTCATAAGGCCAAGTGTATTTCTCTCAGTGAACTTTGCAAGGTGAAACAGGACATGTTATGCGTTACTGTTGGAACAACTCAAAGATTTTTTGTCTCAAAACACGGTTGGTTTTATTATGGGTGTACTAAATGTTCTCTAAAGGCATCTGATGTGAACAATCCATACAAATGTTCATGTGGACAGAATGTAGAACATGCCATACCGAGGTTGTATTTTTCAACCTTTAATCAGATTAATTCATTTGCCATTATTCAATATTTGTAG 1065 0.3709 MSRKFSPIKDLNDSKETWRLAVRVVDFWSVINSKGKEHLEMVLMDVSGDRIQVLIRSDHTPKWKARIRENMSCIINNGTVYENDFQWKLCDHDKKFVFIGGTTVKEVEIQNLPPKRFFFKDFNDILGGNCEMNRLEDIIGVVQEINNFQYNNSGKKSFVSLSLKDLKGVIVNCTLWESYGTKFLDFYHDEKNSGAIVIILTHAMIKESQVSNGWSGSKLLINEDIPEITEYLSKLPSNEQTEKPSQSSKGMSLWSGASQFTPVESFVHKAKCISLSELCKVKQDMLCVTVGTTQRFFVSKHGWFYYGCTKCSLKASDVNNPYKCSCGQNVEHAIPRLYFSTFNQINSFAIIQYL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01524 354 Gene3D - 2 107 IPR012340 -
Vivi7g01524 354 SUPERFAMILY Nucleic acid-binding proteins 118 241 IPR012340 -
Vivi7g01524 354 Gene3D - 265 343 IPR012340 -
Vivi7g01524 354 Gene3D - 110 246 IPR012340 -
Vivi7g01524 354 CDD RPA1_DBD_B_like 137 231 - -
Vivi7g01524 354 PANTHER OS03G0429900 PROTEIN 5 334 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi7g01524 354 SUPERFAMILY Nucleic acid-binding proteins 4 107 IPR012340 -
Vivi7g01524 354 CDD RPA1_DBD_A_like 19 104 - -
Vivi7g01524 354 Pfam Domain of unknown function DUF223 40 122 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01524 Vivi-Chr7 71986029 71987710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01524 4 230 Core DNA Replication Machinery Family AT5G45400 25.941 6.21e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01524 - - vvo:131604714 615.15