Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi7g01511 | ATGCTGAGCCAGCACGACTCGGTAAACTCGTCCACCAACACGCTGAGTCAACTCGCTCAGAACATGTTCTCCGACGAAAACAACGACAACAACATCATCATGCTAGCAGCCATTATTTCCCTCCTTCTAGTAATCCTCTTCGTCCTACTCCTCCACCTCTACGCCAAATGCTTCCTAGCTCAGTCCAACTCACAGTCAAATACTCGCCGCCGGCAACCCTCTGTCTCCGACATTCCAACTCCCTCCAACTTTCACCACCATTTCAACACCGAAGCCCAACAACCCTTCAACGGACTCAACCCAACAACAGTTTCGAAGATTCCGACATTTGTGTCGGAACATAAAACAGAGGAACTAGAATGTGTGATATGTTTGAGTTACATTGAAAAAGGTGAGATTGGAAGAAAGTTGCCAAAATGTGGACACGCTTTTCATGTTGAATGCATTGACATGTGGTTGAATTCTCATACCAATTGTCCAATGTGTAGATCTTTGATTGTTGAAGAAGATTCTCATGGTGGTGGCATTGAGATTGTGATTGATGATAGTGCAAGAAGTTATGAGATTAGTGAAAGTGGTTCTGTTTCTGTATCAGAAACTTCTCTGTCTTTGTTTGGTTTTTCTTTCAAGAGAATTATTAGCAAAGTTTTTCTTTCTTCTCATGTAAATGAATTAGATCATGGTTCACAATGA | 693 | 0.4199 | MLSQHDSVNSSTNTLSQLAQNMFSDENNDNNIIMLAAIISLLLVILFVLLLHLYAKCFLAQSNSQSNTRRRQPSVSDIPTPSNFHHHFNTEAQQPFNGLNPTTVSKIPTFVSEHKTEELECVICLSYIEKGEIGRKLPKCGHAFHVECIDMWLNSHTNCPMCRSLIVEEDSHGGGIEIVIDDSARSYEISESGSVSVSETSLSLFGFSFKRIISKVFLSSHVNELDHGSQ | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi7g01511 | 230 | CDD | RING-H2_EL5-like | 120 | 163 | - | - | |
Vivi7g01511 | 230 | ProSiteProfiles | Zinc finger RING-type profile. | 121 | 163 | IPR001841 | - | |
Vivi7g01511 | 230 | SMART | ring_2 | 121 | 162 | IPR001841 | - | |
Vivi7g01511 | 230 | SUPERFAMILY | RING/U-box | 110 | 169 | - | - | |
Vivi7g01511 | 230 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 167 | IPR013083 | - | |
Vivi7g01511 | 230 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 17 | 172 | - | - | |
Vivi7g01511 | 230 | Pfam | Ring finger domain | 120 | 163 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi7g01511 | Vivi-Chr7 | 71667394 | 71668478 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi7g01511 | 30 | 223 | C3H Transcription Factor Family | AT2G42360 | 32.057 | 8.70e-28 | 104 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi7g01511 | 7 | 71667394 | 71668478 | Vivi7g01511 | 7 | 71667394 | 71668478 | ECH |