Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01511 ATGCTGAGCCAGCACGACTCGGTAAACTCGTCCACCAACACGCTGAGTCAACTCGCTCAGAACATGTTCTCCGACGAAAACAACGACAACAACATCATCATGCTAGCAGCCATTATTTCCCTCCTTCTAGTAATCCTCTTCGTCCTACTCCTCCACCTCTACGCCAAATGCTTCCTAGCTCAGTCCAACTCACAGTCAAATACTCGCCGCCGGCAACCCTCTGTCTCCGACATTCCAACTCCCTCCAACTTTCACCACCATTTCAACACCGAAGCCCAACAACCCTTCAACGGACTCAACCCAACAACAGTTTCGAAGATTCCGACATTTGTGTCGGAACATAAAACAGAGGAACTAGAATGTGTGATATGTTTGAGTTACATTGAAAAAGGTGAGATTGGAAGAAAGTTGCCAAAATGTGGACACGCTTTTCATGTTGAATGCATTGACATGTGGTTGAATTCTCATACCAATTGTCCAATGTGTAGATCTTTGATTGTTGAAGAAGATTCTCATGGTGGTGGCATTGAGATTGTGATTGATGATAGTGCAAGAAGTTATGAGATTAGTGAAAGTGGTTCTGTTTCTGTATCAGAAACTTCTCTGTCTTTGTTTGGTTTTTCTTTCAAGAGAATTATTAGCAAAGTTTTTCTTTCTTCTCATGTAAATGAATTAGATCATGGTTCACAATGA 693 0.4199 MLSQHDSVNSSTNTLSQLAQNMFSDENNDNNIIMLAAIISLLLVILFVLLLHLYAKCFLAQSNSQSNTRRRQPSVSDIPTPSNFHHHFNTEAQQPFNGLNPTTVSKIPTFVSEHKTEELECVICLSYIEKGEIGRKLPKCGHAFHVECIDMWLNSHTNCPMCRSLIVEEDSHGGGIEIVIDDSARSYEISESGSVSVSETSLSLFGFSFKRIISKVFLSSHVNELDHGSQ 230
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01511 230 CDD RING-H2_EL5-like 120 163 - -
Vivi7g01511 230 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Vivi7g01511 230 SMART ring_2 121 162 IPR001841 -
Vivi7g01511 230 SUPERFAMILY RING/U-box 110 169 - -
Vivi7g01511 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 167 IPR013083 -
Vivi7g01511 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 17 172 - -
Vivi7g01511 230 Pfam Ring finger domain 120 163 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi7g01511 Vivi-Chr7 71667394 71668478 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01511 30 223 C3H Transcription Factor Family AT2G42360 32.057 8.70e-28 104
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01511 7 71667394 71668478 Vivi7g01511 7 71667394 71668478 ECH