Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01498 ATGGCTAAAGCTAACGCTAATTCATGGGTGAGAGGGAAGTGTATTGGTAAGGGCGCGTTTGGCGTCGTGAATATGGCTTATTCAAAAAGCGATGCTAGAGTTTTCGCTGTGAAGTCTGTTGATACTAAAACAGCGCTTCCGAATCAGTTACAAGCGTTGGAGAATGAGATTGAAATATTGAAACGGTTATCATCATCTTCTTCTTCTTTTTCTCCTCACGTGATATCTTATCTTGGAGATGATGTCACGTGCGAGGGTGAAGGAACGTCGTCGTTTAAGAATCTTCACTTGGAGTACATGCCAGGTGGCACCGTCGCTGATTTGGTTCGTGCTGACGTGGATGAACGGTTAGTTAGAACTTTCGCGTGGTGTTTGGTTAACGCGCTGAGGGATGTTCACGCGCGCGGAGTTGTTCACTGTGATGTTAAGGGGAAGAATGTCCTCGTCGCCGGAGGTTCCGGCTCCGTCGCTAAGCTCGCTGATTTCGGATCGGCGGTGGAGTTTACCGGCGGGAAGTGTTTTTCGCCGCGTGGAAGTCCGCTGTGGATGGCGCCGGAGGTGATTCGGAGGGAGTATCAAGGACCGGAATCTGACGTGTGGTCGCTTGGATGTACCGTGATTGAGATTTTCACCGGGAAGTCACCGTGGGAGGATCGGGGTTTCGATACACTGAGTCGAATTGGATTTGGAGAAGAACTACCGGAGTTTCCTAACGGTTTATCGGAAATTGGGATAGATTTTCTCGAGAAGTGTTTGAGGAGAGATCGGAGCCGGAGATGGAGCTGTGATCAGCTGTTACACCATCCATTTCTGTTACCGTGTGATAGTGCGGTGGAATCGTCGCCTCGGTGTGTTTTGGATTGGGTTGACTCGCGATTCACTGAGTCAGAAAACGAGTTTGAAGATATACAGTTGAATTTTGATACAAATTTAGTTAAAAATAGAATTAGTAAATTAGAGACTGGTTCTAGGGTAAATTGGGAAACAGAGGATTGGGTAGTGGTGAGGGAAGTTTCTTTTGAAGAAGAATCTACAACAGAATCAGGGGCAATATCGGAATTGGACAATGTAGTGAGGGTAGTAGAGGAAATGGAGGTGGGAATACTAATAGAGACTAGTTTGGGATATTCAGATTGTGATGAAAGGGTAAAACGGGAAATGTGGAGGTTGTTGTGGTGGCGTGAGTGTTGTAATCAGTGCAAGTACAACCGCAACCGCAGAAACAGCATTATGGGTGGAAGTGGAAGTTGGTGTGGTTGGAGATGTTGTCGGTATAGATACGGTTGGGAAAAGTTTGATAGGAATATTAGTAGAATATTCATCATTTATACATTTTGTTGTAAAATAATCAAATCATGTTATTTGTTATTAATATATTATTATCCCTTTTGGTTGAAAATGCGGAAATTCATGTTAAAAATCATGGAGGGTGTGTTTATTTTGGGCTTGGATCCTCTCCTTCTATCTTTTCTCTCCACTTCTCTCCTTCACTAA 1494 0.4438 MAKANANSWVRGKCIGKGAFGVVNMAYSKSDARVFAVKSVDTKTALPNQLQALENEIEILKRLSSSSSSFSPHVISYLGDDVTCEGEGTSSFKNLHLEYMPGGTVADLVRADVDERLVRTFAWCLVNALRDVHARGVVHCDVKGKNVLVAGGSGSVAKLADFGSAVEFTGGKCFSPRGSPLWMAPEVIRREYQGPESDVWSLGCTVIEIFTGKSPWEDRGFDTLSRIGFGEELPEFPNGLSEIGIDFLEKCLRRDRSRRWSCDQLLHHPFLLPCDSAVESSPRCVLDWVDSRFTESENEFEDIQLNFDTNLVKNRISKLETGSRVNWETEDWVVVREVSFEEESTTESGAISELDNVVRVVEEMEVGILIETSLGYSDCDERVKREMWRLLWWRECCNQCKYNRNRRNSIMGGSGSWCGWRCCRYRYGWEKFDRNISRIFIIYTFCCKIIKSCYLLLIYYYPFWLKMRKFMLKIMEGVFILGLDPLLLSFLSTSLLH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01498 497 CDD STKc_MAPKKK 8 271 - -
Vivi7g01498 497 Pfam Protein kinase domain 11 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01498 497 ProSiteProfiles Protein kinase domain profile. 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01498 497 Gene3D Transferase(Phosphotransferase) domain 1 3 338 - -
Vivi7g01498 497 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 7 346 - -
Vivi7g01498 497 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi7g01498 497 SUPERFAMILY Protein kinase-like (PK-like) 6 286 IPR011009 -
Vivi7g01498 497 FunFam Serine threonine protein kinase putative 7 320 - -
Vivi7g01498 497 SMART serkin_6 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01498 497 Coils Coil 43 63 - -
Vivi7g01498 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01498 Vivi-Chr7 71458296 71459894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01498 9 347 MAP Kinase Kinase Kinase AT2G30040 58.261 4.51e-124 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi7g01498 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01498 - - tpra:123921217 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01498 7 71458296 71459894 Vivi7g01498 7 71458296 71459894 ECH