Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01497 ATGTCTTGCTCCGTCGCAGTTTCGAATTCGCCTGTGTTTTCTCCTTCATCGTCTATCTTCTGTAAACAATCATCAATCATCACCAACTCTGAATCGTTAACGTTGTCTCTCTCTCATCTCAAACCGAATAACTCATCATCATCAACCACGTCTTCTCCGTCTCCGGTATCTTCTCCGTCTTCTCCGTTTTATCTCCGACTACCGAAACTACCCTCGGTTTTTTCATCTTCATCTTCAACTAACTCTACTGCGCAAAACGATGCTGTTTTGAAGAGAAAGCGACCAACGAGACTTGATATACCGGTTTCTTCTTTGGGATTTGGAGTTCCGGCGACACCGTCTAAGGTGGCGCGTGATGTTGTTGAGGAGGAAGGAGATGGGTATTCGGTTTATTGTAAGAGAGGGAGGAGGGAGTATATGGAAGATCGTTATACTGCTGGGGATAAGCTTCGTGGAGAAAACAATTTGGCTTTTTTTGGGGTGTTTGATGGACATGGAGGTGCGAAAGCGGCTGAATTTGCGGCGAATAACTTGGAGAAGAACATCTTGGATGAGGTTATCATGGGTGAAGAACAAGATGTTGAGGAGGCAGTGAAGCGCGGTTACCTCAATACTGATTCTGAGTTCATGAAACAAGATCTCAATGGTGGTTCTTGTTGTGTAACAGCATTGATTAGGAAGGGTAACTTAGTTGTATCTAACGCTGGTGATTGCCGTGCTGTTATTAGTAGAGGAGGGGTTGCAGAGGCCTTAACGTCTGATCACCGGCCTTCAAGGGAAGACGAACGGGAAAGAATTGAGACCTCGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGCGGATTCAAGGATCTCTGGCTGTATCTAGAGCTATCGGAGATCGACACCTGAAACAATGGGTGACTGCTGAGCCTGAGACTAAAGTTATCAGCATAGAACCTGAACATGACTTGTTAATATTAGCATCAGACGGCTTATGGGACAAGGTCAGTAATCAAGAAGCAGTAGACATTGCCCGTCAATTTTGCGTAGGAAACAACAAACAACAATCATTGATGGCATGTAAAAAGCTTGCAGAATTGTCTGCTTCGCGAGGCTCTTTGGACGATACAAGTGTTATGCTAATCAAATTGAAACATTATACTTAG 1149 0.4439 MSCSVAVSNSPVFSPSSSIFCKQSSIITNSESLTLSLSHLKPNNSSSSTTSSPSPVSSPSSPFYLRLPKLPSVFSSSSSTNSTAQNDAVLKRKRPTRLDIPVSSLGFGVPATPSKVARDVVEEEGDGYSVYCKRGRREYMEDRYTAGDKLRGENNLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMGEEQDVEEAVKRGYLNTDSEFMKQDLNGGSCCVTALIRKGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETSGGYVDLCRGVWRIQGSLAVSRAIGDRHLKQWVTAEPETKVISIEPEHDLLILASDGLWDKVSNQEAVDIARQFCVGNNKQQSLMACKKLAELSASRGSLDDTSVMLIKLKHYT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01497 382 Pfam Protein phosphatase 2C 128 370 IPR001932 -
Vivi7g01497 382 MobiDBLite consensus disorder prediction 73 89 - -
Vivi7g01497 382 FunFam probable protein phosphatase 2C 25 120 381 - -
Vivi7g01497 382 SUPERFAMILY PP2C-like 128 380 IPR036457 -
Vivi7g01497 382 PANTHER PROTEIN PHOSPHATASE 2C 72 376 IPR015655 GO:0004722|GO:0006470
Vivi7g01497 382 MobiDBLite consensus disorder prediction 39 60 - -
Vivi7g01497 382 CDD PP2Cc 127 378 IPR001932 -
Vivi7g01497 382 SMART PP2C_4 117 376 IPR001932 -
Vivi7g01497 382 ProSitePatterns PPM-type phosphatase domain signature. 158 166 IPR000222 GO:0043169
Vivi7g01497 382 MobiDBLite consensus disorder prediction 73 92 - -
Vivi7g01497 382 Gene3D - 116 382 IPR036457 -
Vivi7g01497 382 ProSiteProfiles PPM-type phosphatase domain profile. 127 378 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01497 Vivi-Chr7 71408962 71411003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01497 1 381 PP2C-type Phosphatase Gene Family AT2G30020 63.568 9.14e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01497 K17506 - gmx:100797934 579.711