Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01488 ATGGCAGAGGCCTTACTAGGAGTAGCATTTAAGAATTTGATGGCTCTGCTTCAAAATGAATTTTCTATCACTTCCCAAATCAAGTCAAAGGCTGAAAAGCTATCAGCCACCTTGGATCTGATCAAGGCTGTACTTGAAGATGCTGAGCGGAAACAAGTCACAGACAGGTCTATCAAAGTATGGCTGCAACAACTCAAAGATGCTATATACATGCTCGATGATATTCTTGACGAGTATTCTATTAAATCCAATCAACTTAGGGGAGTCTCATCTTTCAAGCCAAAAAACATCATGTTTCGCCATGTCTTTGGCAACAGGTTGAAAAATATTACAGAGAGATTTGATAAAATTGCTGAAACAAAAAACAAGTTTCTTCTAAGAGAGGGTCTTACTATTAGGGAAAGCTCAATTGAAGTACCTGAATGGCGCCAAACCAGCTCTTTTATTTCTGAACCTAAAGTTTTTGGACGAGAAGGTGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGCGAGGGACTCTGGCTCTCTTTCCATCTATCCAATTGTTGGCTTAGGCGGCGTTGGAAAAACAACTCTTGCTCAATTGGTCTACAATGATGTTAGGGTGAGTAACAATTTTAATACAAAAATTTGGGTTTGCGTTTCTGAGGCATTTTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCACATCTAGGAAGTGTGATTCCTTACATTTAGATGGAATACAAATAAAGGTGCAAAGATTGTTGCAAGATAAAAGATATTTTCTAGTTTTAGACGATGTATGGAACAAAAATCATGAGCTAGAATCTGGATTAAGCCAACAGAAATGGAATAAGTTGAAATCCGTGCTGTTGTGTGGATCTAGAGGCTCTTCCATTTTAGTTTCCACTCGAGATGAGGATGTTGCAGAAATCATGAGAACATGCCAAACCTATCACTTGTCTGGGCTCCCAGAAAATGAATGTTGGTTGCTATTCAAACAATATGCATTTGGACATGACAGAGAAGAACGCGCAGAACTTGTGGCAATAGGTAAGGAAATAGTAAAGAAATGCGGTGGATTGCCTCTTGCGGCACAAGCATTGGGAGGTCTGATGCGATCAAGGAGTGGAGAAAAAGAATGGCTTGAAGTTAAAGACAGCAGAATTTGGGGTTTAACACATGAGGATTCAATCTTGCCTGCCTTGAGATTGAGCTACTTTCATTTAACTCCGACCTTAAAGCAGTGCTTTTCTTTTTGTGCAATATTTCCCAAAGATAGAATAATCATGAAAGAAGAACTGATTCATCTTTGGTTGGCTAATGGATTTATTTCGTCTAGAGAAAATTTGGAGGTCGAAGATGTTGGAAGCATGATTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATCAAGATTGATGAATATTCTGGAGACATTTCTTTTAAGATGCATGATCTTGTCCACGATCTTGCTCAGTCGATAATGGGGCAAGAATGTGTGATTTTAGAGGATGAGAACATGGCTAATTTGTCCAAAAGTACCCATCATATTAGCTTTTACTTTGGTCCTTATTTATCAGTGGATGAGAGTGCTTTGAAAAAAGTAGAGTCCTTACGCTCAATGTTTGAGTTGAATCGTGATAGATATCTACAAACTAATTACTTCCCATTCCCAACAAACTCTTCTCTTCGGGTTTTACGCATTTCCCCTTTCCAGGTATTATCACTAGGAAGCTTAATTCATTTGAGGTATTTGGAACTTTATGATCGTAACTTCGAAAACATCCCTGACTCAATTTGTAACTTGCACAAACTGGAAATCTTGAAATTGATGAATCTCTCAGAATTGAGATGTCTACCAAAACGTTTGACTTGCTTACAAAATCTTAGGCATCTTGTCATTGAAGATTGTGATTCACTTTCTCAATTGTTTCCCTACATTGGAAAATTATCTCGCCTAAGAACATTAAGTGTATACATCATTGGTTTAGAGAGAGGGCAAAATTTGATAGAACTACACAATCTAAACCTTAGAGGAAAACTGAATATTAAAGGGTTAAAATATGTTGGTAGTTTATCTCATGCTCAAGATGCCAATTTGACAGCTAAAAAAGAAATCCATGAAGTATGCATGTCATGGAGTGTCGATGATTATATTACTGACACCCCGACTGTTAGTTCCGAGCAAGTATTAGAAGGGCTTCAGCCACACACAAATCTCAAAAGCTTGAAGATACATTACTATAATGGCTTATGTTTCCCAAGTTGGATCCAAACTCTAACTAGTTTAGTTTCTCTTGAACTTAAGGGTTGCAACAACTGTGTGCAGCTTTCAGGACTTGGTAAACTACCATCTCTTAAGAAACTCGAACTATGTGATATGAATAATCTGAAATTTGTGGATGATAATGATGACGACGATGGCGAATCTCACAACAGTATGAACGTGAAGATTTTCCCATCTCTTGAGGAACTCATATTATTTAATTTACCAGGATTAGTGAAGTTATTGAAACTGGAAAGAGGGGAGATGTTTCGTTGTCTTTCTTTTTTAAGAATTTCCTTTTGCCGTCAACTTAGATTGTCATGTCTTCCATATGTTAAACGCCTCTCTGTATTTGGATGCAACAATGAGTTACTGAGTTCAATCTCAAGCTTCTATGGTCTTACTACCCTTTACCTTGGTATAGGTACAGGAATAACATCCTTTCCAGAGGGGATGTTCAGAAACCTTACTTGTCTTCAAACTCTAGAAGTAGATGCCTTTTTGAACTTGAAGGAGTTACCAAATGAACCCTTTAACCTTGCTTTAATACGTCTGCATATCACTTACTGCAATGAGCTTGAGTCTTTACCAGAAAATATTTGGGAAGGTCTGCAATCCCTTCGGTCCTTGACAATTAGTAGTTGTAAAAAACTGAGATGCTTTCCAGAGGGTATTCGACACCTCACTTCTCTAAAGGTGCTGAATATTTTTTATTGCCCAACATTAGAGGAGCGATGCAAGAAGGAAACGGGGAAGGACTGGAATAAGATAGCGCATATTCCAAAAATAATTATTGTTTAG 3069 0.3767 MAEALLGVAFKNLMALLQNEFSITSQIKSKAEKLSATLDLIKAVLEDAERKQVTDRSIKVWLQQLKDAIYMLDDILDEYSIKSNQLRGVSSFKPKNIMFRHVFGNRLKNITERFDKIAETKNKFLLREGLTIRESSIEVPEWRQTSSFISEPKVFGREGDKEKIVEFLLTQARDSGSLSIYPIVGLGGVGKTTLAQLVYNDVRVSNNFNTKIWVCVSEAFSVKRILCSIIESITSRKCDSLHLDGIQIKVQRLLQDKRYFLVLDDVWNKNHELESGLSQQKWNKLKSVLLCGSRGSSILVSTRDEDVAEIMRTCQTYHLSGLPENECWLLFKQYAFGHDREERAELVAIGKEIVKKCGGLPLAAQALGGLMRSRSGEKEWLEVKDSRIWGLTHEDSILPALRLSYFHLTPTLKQCFSFCAIFPKDRIIMKEELIHLWLANGFISSRENLEVEDVGSMIWNELCQKSFFQDIKIDEYSGDISFKMHDLVHDLAQSIMGQECVILEDENMANLSKSTHHISFYFGPYLSVDESALKKVESLRSMFELNRDRYLQTNYFPFPTNSSLRVLRISPFQVLSLGSLIHLRYLELYDRNFENIPDSICNLHKLEILKLMNLSELRCLPKRLTCLQNLRHLVIEDCDSLSQLFPYIGKLSRLRTLSVYIIGLERGQNLIELHNLNLRGKLNIKGLKYVGSLSHAQDANLTAKKEIHEVCMSWSVDDYITDTPTVSSEQVLEGLQPHTNLKSLKIHYYNGLCFPSWIQTLTSLVSLELKGCNNCVQLSGLGKLPSLKKLELCDMNNLKFVDDNDDDDGESHNSMNVKIFPSLEELILFNLPGLVKLLKLERGEMFRCLSFLRISFCRQLRLSCLPYVKRLSVFGCNNELLSSISSFYGLTTLYLGIGTGITSFPEGMFRNLTCLQTLEVDAFLNLKELPNEPFNLALIRLHITYCNELESLPENIWEGLQSLRSLTISSCKKLRCFPEGIRHLTSLKVLNIFYCPTLEERCKKETGKDWNKIAHIPKIIIV 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01488 1022 PANTHER DISEASE RESISTANCE PROTEIN RP 40 840 IPR044974 GO:0006952
Vivi7g01488 1022 Gene3D - 140 317 IPR027417 -
Vivi7g01488 1022 Gene3D - 404 495 IPR036388 -
Vivi7g01488 1022 CDD RX-CC_like 2 119 IPR038005 -
Vivi7g01488 1022 Gene3D - 321 403 IPR042197 -
Vivi7g01488 1022 SUPERFAMILY L domain-like 483 860 - -
Vivi7g01488 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
Vivi7g01488 1022 Coils Coil 31 51 - -
Vivi7g01488 1022 SUPERFAMILY RNI-like 820 999 - -
Vivi7g01488 1022 PRINTS Disease resistance protein signature 253 267 - -
Vivi7g01488 1022 PRINTS Disease resistance protein signature 180 195 - -
Vivi7g01488 1022 PRINTS Disease resistance protein signature 958 974 - -
Vivi7g01488 1022 PRINTS Disease resistance protein signature 357 371 - -
Vivi7g01488 1022 FunFam Probable disease resistance protein At1g63360 405 494 - -
Vivi7g01488 1022 Pfam NB-ARC domain 158 385 IPR002182 GO:0043531
Vivi7g01488 1022 Pfam Rx N-terminal domain 6 101 IPR041118 -
Vivi7g01488 1022 Gene3D - 6 120 - -
Vivi7g01488 1022 Gene3D Ribonuclease Inhibitor 666 862 IPR032675 -
Vivi7g01488 1022 Gene3D Ribonuclease Inhibitor 524 665 IPR032675 -
Vivi7g01488 1022 Gene3D Ribonuclease Inhibitor 863 1009 IPR032675 -
Vivi7g01488 1022 FunFam Probable disease resistance protein At1g61300 137 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01488 Vivi-Chr7 71146792 71150357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01488 183 801 WRKY Transcription Factor Family AT5G45050 23.958 7.54e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01488 - - mtr:11405813 1281.54