Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01433 ATGGTTTCACCAAAGTCCTTGCTCTTTTTATTCAATCTATATCACCTTCATATTTTCATTGAAATGTTTGGTAATGAAAATATAAATACCAATGATCCTTTCATGGATAGATCCTTATATGGCCAAATGATTCACTACCCTAACCATCAAGAGAATAATGCAAGTGTTTTTCCTTACTCTTATGGTTCAAACTATGATCATTTTATGTGGCCAAATGCTCAAGAATCAAACTTTGTTGTTGATCGTGAGGTCTTAGCAAATGAAGAGGCTTTGAAGTGGAATAACTTCAACCAAACCTCAACATTGTGCCTTAAGGATACTAATGGTTATGGCGAAAACACGAAAATTATGGGAAAGAAAGGTAAGAAAGAGAAAGAGACTTCTATGGTTTGGATTAAAGGACAATGGACTGATGATGAAGACAGGAAACTGATAAGGTTGGTGAAAGAAAATGGTGAAGGAAAATGGACTCAAATAGCCGAGAAGTTAGAAGGAAGGGTTGGCAAGCAGTGTCGAGAGCGATGGCATAATCACTTGCGTCCCGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCCATGCATGCAAAAATGGGGAACAGATGGGCTGAGATAGCAAAGAGGATTCCAGGAAGAACTGAAAATGCCATAAAGAATCATTGGAATGCAACTAAAAGAAGACAAAACTCAAAAAGAAAGAACAAGAGGAAGATTGAAACTTCCAATGGATCAAACCCTAAATCCTCTATACTTGAAGACTATATCAAAAAAACCACAATTACCAACATACCCTCTTCCACTCATACAACACTCTCCCAAAACCTTGAACAAAATCATTCAAACCCTAACCCTAGTTTGTTCAATGAACTACCCTATGATTCTTTTTCCAATGAATATTTGGAGTTTTTTCAAGGTAACAACATTGTTGATGATGTGGATGAGAGTGGACTTGTTAATTCAGTGCAATATCCAAACTACAACATGCACTTGAATTATGAGACTACTCCAACTAATCATATTAATAATTTCCTTTCTTATGATCTCTACCTTTCTCAATTGTTGAATTAG 1083 0.3573 MVSPKSLLFLFNLYHLHIFIEMFGNENINTNDPFMDRSLYGQMIHYPNHQENNASVFPYSYGSNYDHFMWPNAQESNFVVDREVLANEEALKWNNFNQTSTLCLKDTNGYGENTKIMGKKGKKEKETSMVWIKGQWTDDEDRKLIRLVKENGEGKWTQIAEKLEGRVGKQCRERWHNHLRPDIKKDSWSEEEEKILVAMHAKMGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRKNKRKIETSNGSNPKSSILEDYIKKTTITNIPSSTHTTLSQNLEQNHSNPNPSLFNELPYDSFSNEYLEFFQGNNIVDDVDESGLVNSVQYPNYNMHLNYETTPTNHINNFLSYDLYLSQLLN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01433 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 183 IPR017930 -
Vivi7g01433 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 234 IPR017930 -
Vivi7g01433 360 ProSiteProfiles Myb-like domain profile. 180 230 IPR001005 -
Vivi7g01433 360 Gene3D - 132 184 - -
Vivi7g01433 360 Pfam Myb-like DNA-binding domain 136 194 - -
Vivi7g01433 360 CDD SANT 187 230 IPR001005 -
Vivi7g01433 360 PANTHER MYB PROTEIN-RELATED 117 254 - -
Vivi7g01433 360 SUPERFAMILY Homeodomain-like 132 226 IPR009057 -
Vivi7g01433 360 MobiDBLite consensus disorder prediction 229 256 - -
Vivi7g01433 360 CDD SANT 136 179 IPR001005 -
Vivi7g01433 360 ProSiteProfiles Myb-like domain profile. 133 179 IPR001005 -
Vivi7g01433 360 SMART sant 132 181 IPR001005 -
Vivi7g01433 360 SMART sant 184 232 IPR001005 -
Vivi7g01433 360 MobiDBLite consensus disorder prediction 270 293 - -
Vivi7g01433 360 FunFam Transcriptional activator Myb isoform A 132 185 - -
Vivi7g01433 360 Gene3D - 186 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01433 Vivi-Chr7 70060040 70062709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01433 124 360 MYB Transcription Factor Family AT5G58850 48.529 9.22e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g01433 Myb_DNA-bind_6 6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01433 K09422 - aprc:113874412 294.664