Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01394 ATGAAAGTTATGAACTTTTCTTGTGGTGTAACAAAACCCAATTTTCCGTTTTCCCAAACAGAAATGCCAATTTTAACATCATTTGGTCATTCTAAGTTGACTGCTACCCTAGCTTTTCAATTGCCATGTATTTGTGTTAGGAAGATGAGGTTGATTACAAAGCTCCAGTGTTCTGTTGCTAATAGGATGTTTACTTCTAGCTCCGGTGGTTCGCAGGGACCTAAACGGGGAGGTCCCTCTTCGTCGTATGTTGGTTACGCTCGTCCTAGTTTAAATGAAATGAAGAAAGATAAGGTGGCGATGCGTGAAAATGTTTACGAGTTCTTGCGAGGAATTGGCCTTGTTCCTGATGAACTTGATGGTCTTGAGCTTCCTGTTACGGTTGATGTTATGAAGGAGCGTGTGGATTTTCTTCATAACTTGGGGCTTACGATTGAAGATATTAACAACTATCCTCTTGTTCTTGGTTGTAGCGTCAAGAAGAATATGGTGCCTGTGCTTGATTATCTTGGTAAATTGGGAGTTAGGAAATCCACGCTAACGAAGTTTTTGAGGAGATACCCGCAAGTGCTTCATGCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTTAGGTATCTTCAAGGGATGGATATCAAACCCAATGATGTTCCTCGTGTTCTTGAGAGGTATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACTATGAGCACATCAGTTGCTTATTTGATTGGAATTGGTGTTGGAAGAAGAGAACTCGGAGGTGTCTTAACTAGATACCCGGAGATTTTGGGGATGCGGGTTGGTCGAGTCATCAAGCCTTTTGTGGAGTATCTAGAAAGCTTGGGTATTCCAAGGCTAGCCATTGCTAGACTAATAGAGACACAACCATATATTCTTGGATTCGATCTCGACGATAAGGTGAAGCCAAACGTCAAATCCCTCGAAGAGTTTAATGTTCGGCAAACGTCAATTGCCTCGATAATTGCTCAGTATCCTGACATCATTGGAGCTGACCTAGAGCCAAAGCTTGCCAATAAGAAAAGCGTTCTCAATGCTGTACTTGATTTAGATCCTGAGGATTTTGGCTTAATCGTTGAGAAAATGCCGCAGGTAGTAAGCCTCAATAGTACACCTATGCTAAAGCATGTTGATTTTCTTAAGGAATGCGGATTTTCTGTGGTGCAAATAAAGAAGATGATTATTGGGTGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTTGATTACTTCCAAAGCGAGATGGAACGGCCTTTGGAAGACATGGTTGAATTCCCAGCATTTTTCACTTATGGTTTGGAGTCAACTATAAAACCTAGGCATACCATGATTGCAAAAAAAGGATTGAAGTGTTCACTGGCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAGCGGATGGATTATGACACTATTGACATGGAAGAGATGGAAATGAAACCATCTTTTGACATGAACTCATTGATGCGACCAAGGAATGATGAATCGGATTCTGATTATGAATACAGCGATTCTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAGTGA 1614 0.4095 MKVMNFSCGVTKPNFPFSQTEMPILTSFGHSKLTATLAFQLPCICVRKMRLITKLQCSVANRMFTSSSGGSQGPKRGGPSSSYVGYARPSLNEMKKDKVAMRENVYEFLRGIGLVPDELDGLELPVTVDVMKERVDFLHNLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTLTKFLRRYPQVLHASVVVDLVPVVRYLQGMDIKPNDVPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDDKVKPNVKSLEEFNVRQTSIASIIAQYPDIIGADLEPKLANKKSVLNAVLDLDPEDFGLIVEKMPQVVSLNSTPMLKHVDFLKECGFSVVQIKKMIIGCPQLLALNIDIMKLSFDYFQSEMERPLEDMVEFPAFFTYGLESTIKPRHTMIAKKGLKCSLAWMLNCSNEKFEQRMDYDTIDMEEMEMKPSFDMNSLMRPRNDESDSDYEYSDSDDDDDDDDDDDDDDDDDDDDE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01394 537 Pfam mTERF 167 475 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 Gene3D Transcription termination factor 3, mitochondrial 147 270 IPR038538 -
Vivi7g01394 537 Gene3D Transcription termination factor 3, mitochondrial 271 484 IPR038538 -
Vivi7g01394 537 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 217 248 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 362 392 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 325 357 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 429 460 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 397 428 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Vivi7g01394 537 FunFam Transcription termination factor MTERF4, chloroplastic 269 483 - -
Vivi7g01394 537 MobiDBLite consensus disorder prediction 491 537 - -
Vivi7g01394 537 MobiDBLite consensus disorder prediction 510 537 - -
Vivi7g01394 537 FunFam Transcription termination factor mterf4, chloroplastic 131 268 - -
Vivi7g01394 537 SUPERFAMILY ARM repeat 391 536 IPR016024 -
Vivi7g01394 537 PANTHER CGI-12 PROTEIN-RELATED 166 478 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01394 Vivi-Chr7 69251027 69253176 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g01394 mTERF 1.7e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01394 K15031 - gmx:100785223 779.63