Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01353 ATGGATAATAATATCCCTGAAGCTGAAACTGTGAGAAAGAGAGTAATAATCAAAGAGCTTCTAAAGGGTCAAGAAGCTGCAACCAAACTCAGATTTCTTCTTCAAAATGACAAGAATCCATTTGGTGATGGCTCTCTCTTATCGTACAAACTTGCTTCAAATGTGCTTAGATCTTTCACAGAAGCTCTTTCTATTGTCTCACAGCCAGGTTGTGATGATTTTCTGAATCTGCTAAACTCCGAGCCGGTGGCGGTAGGCGGCGGCATTGATCCACCGTCTGGAGATTCAGCTGGTAGTGTTGTTAAGAAGACTTCAAGAGGTTGCTACAAAAGAAGGAAGTGTGCAGAGACATGGAGCATAGTTTCCCAAACCCTTGTTGATAATCATTCATGGAGAAAGTATGGACAGAAAGGGATCATGAATTCTGAATACCCCAGGAGTTACTTCAGGTGCGCATTTAAGCATGATCAAGGTTGCTTAGCAATCAAACAGGTGCAAAAAACACAAGACAAACCTGATATGTATGAAATTACATACATTGGCATTCACACATGCAACACCACTCCTAATAATGAGACAATGTTTCTTGTGGATTCTGATCATGATGAAGAAAATACTACAAGTATTGTTGCAAATAAACAAGAGCAAGAATTAATGGAATTTGATGATGTTGCTGATGATGCTGTGTTAGTGTTTCAAAGCCTGGCAATGGAGTTTGGGGACAATGACTTCCACTTTGATTAA 744 0.3978 MDNNIPEAETVRKRVIIKELLKGQEAATKLRFLLQNDKNPFGDGSLLSYKLASNVLRSFTEALSIVSQPGCDDFLNLLNSEPVAVGGGIDPPSGDSAGSVVKKTSRGCYKRRKCAETWSIVSQTLVDNHSWRKYGQKGIMNSEYPRSYFRCAFKHDQGCLAIKQVQKTQDKPDMYEITYIGIHTCNTTPNNETMFLVDSDHDEENTTSIVANKQEQELMEFDDVADDAVLVFQSLAMEFGDNDFHFD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01353 247 Gene3D WRKY domain 109 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g01353 247 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 203 IPR044810 GO:0003700
Vivi7g01353 247 ProSiteProfiles WRKY domain profile. 127 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01353 247 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01353 247 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g01353 247 SUPERFAMILY WRKY DNA-binding domain 123 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01353 Vivi-Chr7 68290841 68296952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01353 11 245 WRKY Transcription Factor Family AT3G56400 33.333 1.17e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g01353 WRKY 8e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01353 7 68290841 68296952 Vivi7g01353 7 68290841 68296952 ECH
Vivi7g01353 7 68290841 68296952 Vivi3g02617 3 44098359 44100572 PCT