Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01334 ATGCCTCACAGAGCAACTTACTTTTTTCCTAGGCAATTTCCAGAGAAAAGATTGGATGAATCTTCCAACAAGATTTTAGATCACGAGAAGAAAAAACTTGCAGTCAATTCAACTGATGCAACTTGTTGCATTGAAAATGATATTGTTACTGCAACTTCTGCTTCTCATAAAGACGACGTCGTTTTCTCTCCGGCTAAAAACTCGGCTGTTTCTGATCTTCTTAGTAGCGGCGATAAGTTCCGATGCGAACAGAAGCAGATTGCTGCGTTTTGTGATTGGTTGGTTGATAAACGACATACTCATCATTCTCATCATGCTCGTCATTCTCATCATGCTCATCACCATCACCACCGTCGTCATCAGCATCATCATCATCACCGTCACCGATCGGATCAATGTCTACCTGAAGACGAGCCTCTACTTCCGGATTTGCATGCGGAAAAGGATGCTGTTGCTGCTGATCGGAGCTTTGATCGGGAAGTTTCGCTTCCGAGATTATCAAGTGGAAGTAGTTACGCTGCGAGTTTGTTTGCTTCGGATGTTACCGTTACTGCTACATTCTCGAGCGATGACATTGCTAGAGAAGATACTACGTCGTCGTTTCGTGTTTCTACGAATGAAGCTGCGAGAAGGAACGAACAGCATCAACACAAGGAGGAAGAGGAACAACATGAAGAAGAAAAATGCGGCGAAGAAGAGAACTACACTAAGAAGTATAAAGAAAGCTATGAACTACAATTTGCTTTGGCGAAGAGGCTTTCTTTCTTATCAAGCTTTGGTTCTGAACCGGTTCTCACTTTCGATACTGGATTAGAAACTTGGGACGTTGAATCCGTTTCTCGTCGCTTATGGGTGACGGGATGTTTGTCTTACACGGACAAGATTTCGGACGGATTTTATAACATATTGGGAATGAATCCGTATTTGTGGTTGATGTGTAATGACATGGAGGAAGAAGGGAATTGCCTTCCTACGTTGATGGCGCTTAGAGCGGTTGAGCCCAATGAGAGTTCATTGGAAGTGATTCTTATTGATAGACGAGAGGATTCTCGTCTTAAGGTACTTCAAGATAAAGCTCAAGAGCTGTATTCTGCTTCTGAGAATACCTTGATGCTTGTTGAAAAGCTCGGAAAACTTGTTGCTATCTTTATGGGGGGCACCTTCCCTATGGAGCAAGGGGATATGCAAAGGAGGTGGCAGATGGTCAGCAAGAGGTTGAGGAATTTTCATCAGTGTGTTGTGCTTCCCATTGGTAGTTTGTCTACAGGAATCTGTAGGCATCGTGCAATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTACCATGCCGCATTGCTCGAGGTTGCAGGTACTGTGCATCAGATCATCAGTCGTCTATTCTTGTCAAGATTAAAGATGACAGACAACTGTCAAGGGAGTATGTTGTTGACCTGGTTGGGGAACCAGGAAATATTCTTGGGCCAGATTCATCAATTAATGGAGCATATGCATCTTCCACACCTTCCCCATTTCAAATATCTCATTTGAGAAAATCTCAGTCGCCCTATGTGGATAATGCAGCATCTCCTCAAGTTATAGGTGTTAATCAGATTTCTCCCCAAGTTATAGGTTTTAATCAGATTTCTCCCGACAATCACCTGTATTCAGGCCGTTTACAGGAAGAACAACTAAGTAAAGAAACTGATTTGCTGAAAAATAATAATGGCTTCATTTATGCTCCAGTCGATCAAACTTGTGGAGGTGCTTCTGAAGCTCTTTGCCCAGCCTCTGAAGCATTATTACATGAAATTCCATTTGTTGGTAAGGACTCAGTTGTAGTCCAAGAAATTTCTTATAATGAGATCATTGCAAAGGGAAGTTTGGTGGTAAATGGCATCCAGTCAAAGCAGGAACATGTAGACAGTAGACAGGGTGCTGGTGATATTCCAAAATATGTAAATCTTGAACCATCACTAGCAATGGACTGGCTTGAGATATCATGGGATGAACTACGGATCAAAGAGCGCGTTGGTGCTGGATCATTTGGGACAGTGTACCGTGGTGAATGGCATGGATCAGATGTTGCTGTCAAAGTTTTATCAGTTCAGAATTTTCATGATGAACAGTTGAAAGAGTTTTTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTTCTCTTCATGGGTGCGGTTACAAAACGTCCCCATTTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTTCGCCTGATACATAGACCAGTGTCGAATGAAATTCAGGATCCAAGGAGAAGATTACGAATGGCTATAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATTGTGCATTGGGATCTCAAATCCCCAAACCTGTTGGTAGACAAACATTGGAATGTAAAGGTGTGTGATTTTGGGCTGTCGAGATTTAAGGCGAACACTTTTTTGTCATCAAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCAGAATTTCTCCGTGGAGAACCTACAAATGAGAAGTCTGATGTATACAGTTTTGGAGTTATCCTGTGGGAACTCGTGACCTTACAACAGCCATGGGAAGGACTTAGCCATGCCCAGGTGGTTGGAGCTGTGGCATTCCAGAATAGGAGGCCTTCTATCCCTCCAAACATCTCTCCGGTATTAGCCTCCCTAATGGAATCTTGTATGGCAGATAACCCTGCTGAACGCCCATCTTTTGCTAGCATAGTTGAGACACTAAAGAAGCTTCTAAAGTCACCCGCAGATGCGATAAAAATGGGTGGAACATTAGAAGCCTGCCGCCCATCATAA 2826 0.4296 MPHRATYFFPRQFPEKRLDESSNKILDHEKKKLAVNSTDATCCIENDIVTATSASHKDDVVFSPAKNSAVSDLLSSGDKFRCEQKQIAAFCDWLVDKRHTHHSHHARHSHHAHHHHHRRHQHHHHHRHRSDQCLPEDEPLLPDLHAEKDAVAADRSFDREVSLPRLSSGSSYAASLFASDVTVTATFSSDDIAREDTTSSFRVSTNEAARRNEQHQHKEEEEQHEEEKCGEEENYTKKYKESYELQFALAKRLSFLSSFGSEPVLTFDTGLETWDVESVSRRLWVTGCLSYTDKISDGFYNILGMNPYLWLMCNDMEEEGNCLPTLMALRAVEPNESSLEVILIDRREDSRLKVLQDKAQELYSASENTLMLVEKLGKLVAIFMGGTFPMEQGDMQRRWQMVSKRLRNFHQCVVLPIGSLSTGICRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSTPSPFQISHLRKSQSPYVDNAASPQVIGVNQISPQVIGFNQISPDNHLYSGRLQEEQLSKETDLLKNNNGFIYAPVDQTCGGASEALCPASEALLHEIPFVGKDSVVVQEISYNEIIAKGSLVVNGIQSKQEHVDSRQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERVGAGSFGTVYRGEWHGSDVAVKVLSVQNFHDEQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPVSNEIQDPRRRLRMAIDVAKGINYLHCLKPPIVHWDLKSPNLLVDKHWNVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTLQQPWEGLSHAQVVGAVAFQNRRPSIPPNISPVLASLMESCMADNPAERPSFASIVETLKKLLKSPADAIKMGGTLEACRPS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01334 941 MobiDBLite consensus disorder prediction 196 233 - -
Vivi7g01334 941 Pfam Protein tyrosine and serine/threonine kinase 664 918 IPR001245 GO:0004672|GO:0006468
Vivi7g01334 941 MobiDBLite consensus disorder prediction 208 233 - -
Vivi7g01334 941 CDD STKc_MAP3K-like 670 918 - -
Vivi7g01334 941 ProSitePatterns Protein kinases ATP-binding region signature. 670 691 IPR017441 GO:0005524
Vivi7g01334 941 SMART serkin_6 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01334 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Vivi7g01334 941 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 201 923 - -
Vivi7g01334 941 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Vivi7g01334 941 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Vivi7g01334 941 PRINTS Tyrosine kinase catalytic domain signature 738 751 IPR001245 GO:0004672|GO:0006468
Vivi7g01334 941 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Vivi7g01334 941 MobiDBLite consensus disorder prediction 102 139 - -
Vivi7g01334 941 ProSiteProfiles Protein kinase domain profile. 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01334 941 FunFam Serine/threonine-protein kinase isoform 1 654 742 - -
Vivi7g01334 941 SUPERFAMILY Protein kinase-like (PK-like) 644 918 IPR011009 -
Vivi7g01334 941 Gene3D Transferase(Phosphotransferase) domain 1 743 930 - -
Vivi7g01334 941 MobiDBLite consensus disorder prediction 102 129 - -
Vivi7g01334 941 Pfam Ethylene-responsive protein kinase Le-CTR1 276 485 - -
Vivi7g01334 941 FunFam Serine/threonine-protein kinase CTR1 743 928 - -
Vivi7g01334 941 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01334 Vivi-Chr7 67777555 67784279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01334 1 933 MAP Kinase Kinase Kinase AT4G24480 54.359 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi7g01334 PK_Tyr_Ser-Thr 7.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01334 - - vvo:131620676 1784.23