Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01331 ATGGCCGAACACCAAAACAAGATGTGTCTTTTCACCGCAACCAACAACGGTTTTTTCCTTGACCCTACAAAATGCGGTGTTATGAATTTCCAAGAGAAGCAAAAACTGGTCCGTGAAGTTGCCTGTCAGTCCAAAGATGCTCCGGAAATACTTCAATCATTTACTCGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAGAAAGGAAGTACACTGGATATACTAAGGGTCAGATGATAGAATATCTTCTGAAGTTAATTTCTAAGAAATCCAACGTGTACGTCGACCAAAATGATCTTGCTCATTCTCCTGCCAAAAGTTGCGTAGGATCTAAAAGGAAAAAAGGACCTCCGACTCTGGATTTACGTAATGTTCAACTAGAGAACATGAATGAGGAAACAACAAAAACCTTAGTGTGTCGGAATGTTGCATGCAAAGCTATGCTGAATCCAGAAGATTCATTTTGCAAGAGATGTTCTTGTTGTATTTGTCGTTGTTACGATGATAACAAGGATCCTAGTCTGTGGTTGACCTGCACCTCTGATAAACCGAATGAAGAGTCATGTGGAATGTCATGTCATTTGCAATGTGCTTTGAGTAGTCAAATGTCTTGCATTTTGAAGGGAAGTCGCGGTGTAAGCTTGGATGGAAGCTTCTGTTGTGTTTCTTGCGGAAGAATTAATGACTTAATGAGGACATGGAGAAAGCAATTATTGGTTGCCAGAGAAGCAAGAAGAGTGGATATACTCTCTCTGCGAATTTCCTTGGCGCACAGAATTCTCATAGGAACAAAAGTATACACTGAAGTGCATAAGATTGTAGAAACTGCTCTCAAATTATTGGAGAATGAAGTGGGGCCTCTGGATCACGTATATGCTAGGATGACGCGTGGAATTGTGAGCCGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTACTGCAGTTGAATGTTTTGATTTAAAGTTTTCTGAACTCTTTTCTAGTTGTGAAGAAAAGAAAGAAGCACCAACATGCTCTTTACGTTTTGAAGAGTGTCTTCCGACCTCAGTGGTCATTGTGCTCGAATACAAAGACAAACTCTTAAAGAACTTTCTAGGCTGCAGACTTTGGCACAGAATATCATCAATGGACTACCCAGAACAACCGACTTTCATTGTTTTGAGGCCCGAGAAAAGATTCAAGTTAGAAAACCTCATTCCTGCAACCGAGTACTCTTGCAAGGCTTCTATATTCAGCAGCACGGGGATTTTGGGTGCAGCAGAAGCTAAATGGGTGACACCCTGTGAACCGCCGTCAAAATTCATTCGACAAATTGGAAACTATTCTTCAACTATGAACAGATATCCACAAGACCAGATTAAGATGTCTTCTGAAAAACCCGCAGTTTTAAACATCAGGGACAGGTTTGAAGAGTTTCTGACAAAGCCTGCAACGATAGACCCTTTTTCGTATAAAAGTTTTGCAGCAGTTCCACCTGCCACGCCTTCTAAACCGAATGAGATGAGACAAGTTACTGGTTTGAGTTCTAGAAAGCGCGTGAAGGAGAACGATTACGAGTATTCTGTGAGAGTAGTGAAATGGTTGGAGCATCAAGGGCACATAGATGAAATCTTTAGAGTGAAGTTTCTCACTTGGTTTAGTCTCAAGGCGAATCAACAAGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCACTGATTGATGACCCTGCAAGCTTAGCAGATCAGCTAATACACACTTTCACCGACGAAATTTGTAGCGAGCAAAAATCTTAG 1785 0.4157 MAEHQNKMCLFTATNNGFFLDPTKCGVMNFQEKQKLVREVACQSKDAPEILQSFTRRELLELICAELGKERKYTGYTKGQMIEYLLKLISKKSNVYVDQNDLAHSPAKSCVGSKRKKGPPTLDLRNVQLENMNEETTKTLVCRNVACKAMLNPEDSFCKRCSCCICRCYDDNKDPSLWLTCTSDKPNEESCGMSCHLQCALSSQMSCILKGSRGVSLDGSFCCVSCGRINDLMRTWRKQLLVAREARRVDILSLRISLAHRILIGTKVYTEVHKIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFDLKFSELFSSCEEKKEAPTCSLRFEECLPTSVVIVLEYKDKLLKNFLGCRLWHRISSMDYPEQPTFIVLRPEKRFKLENLIPATEYSCKASIFSSTGILGAAEAKWVTPCEPPSKFIRQIGNYSSTMNRYPQDQIKMSSEKPAVLNIRDRFEEFLTKPATIDPFSYKSFAAVPPATPSKPNEMRQVTGLSSRKRVKENDYEYSVRVVKWLEHQGHIDEIFRVKFLTWFSLKANQQERRVVSAFVDALIDDPASLADQLIHTFTDEICSEQKS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01331 594 PANTHER VIN3-LIKE PROTEIN 2-RELATED 18 438 IPR044514 GO:0010048|GO:0040029
Vivi7g01331 594 CDD PHD_VIN3_plant 162 226 - -
Vivi7g01331 594 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01331 Vivi-Chr7 67737796 67742114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01331 20 594 PHD Gene Family AT5G57380 32.692 1.75e-95 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01331 - - gmx:100785502 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01331 7 67737796 67742114 Vivi7g01331 7 67737796 67742114 ECH