Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01330 ATGGAGAGAAAACGTTCTTTTTCTACCTTCAACAACAACACCAACAGCTTCAAAAAGACGTTGCAAGTAAGAACCAATCAAAACAAGAACAAACCTTCTTTCACCAAAGAAGACTCTGCGATTCTCTTGAAAAAGTATGATGCGAGAACAGTGTTGAAGCTGTTGCAGGAAGTGGCGAGTAATGCAGGTTGGAAGATTAATTGGAAGGAATTGGTGAAGAAAAGTTCGACTGGAATTTCGAGTGTGGAAGAGTATCGAATTCTGTGGCGGCATTTGGCGTATGGTGATTCATTGATTGACGATGATTTTCAAGATCTGGATGATGATAGTGATTTGGAATGTGAGCGGAAACCATTCCCACCAATATCCAAGCAAAATGAATCCCAAGCTGCAGCATGTGTCCAGGTAATGATTGAATCTGTTGCAATGAGTAAATCAGCACCAAGTAGCTCAACAATTGAAGTTCCATTGCCTATAAAAGTTGCTTCATCTAATTTGAATGAAGAGACAACCATTAGTTTTCCAGTTCTTGTGGATAGACCAACAAGGGTAAATAATGATACAAATGCATCATCAAGAAAAGGAGCATGGTCAAGGGAAGAGGACATAGAATTACAAGCTGCTGTTCAGAAATGGGGTGAAGGGAATTGGACAGAGATGGCTGCAAGAGATGATTTTACTCTTAATAGAACTGCTGCACAGTTGTCTAAGAGGTGGAGAATTTTAAGAAATAAAGCTGACACTAACTGA 750 0.396 MERKRSFSTFNNNTNSFKKTLQVRTNQNKNKPSFTKEDSAILLKKYDARTVLKLLQEVASNAGWKINWKELVKKSSTGISSVEEYRILWRHLAYGDSLIDDDFQDLDDDSDLECERKPFPPISKQNESQAAACVQVMIESVAMSKSAPSSSTIEVPLPIKVASSNLNEETTISFPVLVDRPTRVNNDTNASSRKGAWSREEDIELQAAVQKWGEGNWTEMAARDDFTLNRTAAQLSKRWRILRNKADTN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01330 249 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 25 247 - -
Vivi7g01330 249 SMART sant 193 245 IPR001005 -
Vivi7g01330 249 Pfam Myb-like DNA-binding domain 194 240 IPR001005 -
Vivi7g01330 249 ProSiteProfiles Myb-like domain profile. 189 243 IPR001005 -
Vivi7g01330 249 SUPERFAMILY Homeodomain-like 192 243 IPR009057 -
Vivi7g01330 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 247 IPR017930 -
Vivi7g01330 249 CDD SANT_TRF 197 244 - -
Vivi7g01330 249 Gene3D - 185 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01330 Vivi-Chr7 67720297 67722237 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g01330 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01330 - - vvo:131617349 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01330 7 67720297 67722237 Vivi7g01330 7 67720297 67722237 ECH
Vivi7g01330 7 67720297 67722237 Vivi3g02063 3 33951457 33960251 PCT