Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01314 ATGCTGAGCGCAACTCGATTAGAAGCTGAACGGTTACTCGGAATCTCAGAGAAGCTCTTACAGAACCGAGATCTAATGGGTTCAAAAGAATTCGCAATCTTAGCTCAAGAAACCGAACCTCTTCTCGAAGGTTCCGATCAGATCTTAGCCATCATCGACGTTCTCATCGCCTCCGAGAAACGCGTCAACAACAACCCTGACTGGTACTCCATCCTCCAAATCGATCGCCGATCCGACGACGGTGACCTCATCAAGAAACAGTACCGCCGTCTCGCTCTTCTCCTGCATCCGGATAAAAGCAGGTTTCATTTCGCCGATCATGCTTTCAAGCTTGTTGCTGATGCTTGGGCGGTTCTCTCCGATCCAATCAAGAAGTCGAACTATGATAAAGAGCTCTCGTTTTTCTCTCGGGTTGATTTGTCTGTTCCCGGTTGGGTTCAGCAAGATAAGGTGCCGGTGCCAGGGCCGGTTCGGAGAACCGGTCCTGTACCTGGACCGGAAACTGGAGCCGGTCCAAGGAACAGTGCTGCTGCTGCTAGAGATGGAATAGCTGCTGATGAAAACGCGCGTCGTAGGAACGCGACTTTTTGGACTGCTTGTCCTTACTGTTACCGTTTGTATGAGTTTCCTAAGGTTTATGAGGGTTACTGTTTGAAATGTCCTAATTGTGAAAGATCTTTTCACGGTGTTAATATTCCGTCTCTGCCGCCGTTAGTTCCGGGGCAAGATGCTTATTATTGTTGCTGGGGTTTTTTTCCGATGGGTTTTGTTCTTGGGAATGTTGGTTCAGAAGAGAAAGAGACTGAACTGCCAGAGACGGAAACGGTTCCGGTGCCGATATCGGTTCAGGCTGCTGCTCCGTTTCAGCCTGCTGCAGCTTCGTTTCAGTCTGCTTCGGTGCAGCCGGCTTCGTCGCTGCCGAATTGGATGCCGGCGCCTGTGCCAGTGGAGAATGGTGGGAATAATGTAATGCCGGTGGTGCCGCCGAGGGATGTTGTGGTTGCTACGCCTGCAAGGGTGACGACAAGATCAGGTGTTGTTTCGAATGGTGTTGCTCCCAGGGGTTCGGGAACGGGTAAGAAGCGTGGAAGGCCGAGGAAGTATTATTGA 1110 0.5099 MLSATRLEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIIDVLIASEKRVNNNPDWYSILQIDRRSDDGDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPIKKSNYDKELSFFSRVDLSVPGWVQQDKVPVPGPVRRTGPVPGPETGAGPRNSAAAARDGIAADENARRRNATFWTACPYCYRLYEFPKVYEGYCLKCPNCERSFHGVNIPSLPPLVPGQDAYYCCWGFFPMGFVLGNVGSEEKETELPETETVPVPISVQAAAPFQPAAASFQSASVQPASSLPNWMPAPVPVENGGNNVMPVVPPRDVVVATPARVTTRSGVVSNGVAPRGSGTGKKRGRPRKYY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01314 369 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Vivi7g01314 369 MobiDBLite consensus disorder prediction 153 175 - -
Vivi7g01314 369 Pfam DnaJ domain 67 129 IPR001623 -
Vivi7g01314 369 SMART dnaj_3 66 124 IPR001623 -
Vivi7g01314 369 PRINTS DnaJ domain signature 88 103 IPR001623 -
Vivi7g01314 369 PRINTS DnaJ domain signature 104 124 IPR001623 -
Vivi7g01314 369 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vivi7g01314 369 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Vivi7g01314 369 Gene3D DnaJ domain 55 139 IPR036869 -
Vivi7g01314 369 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Vivi7g01314 369 CDD DnaJ 67 121 IPR001623 -
Vivi7g01314 369 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 293 - -
Vivi7g01314 369 MobiDBLite consensus disorder prediction 345 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01314 Vivi-Chr7 67521345 67523285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01314 5 366 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.989 7.43e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01314 - - psat:127118671 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01314 7 67521345 67523285 Vivi7g01314 7 67521345 67523285 ECH
Vivi7g01314 7 67521345 67523285 Vivi3g02049 3 33827451 33828442 PCT