Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01281 ATGGAATTCGATGAACCAGAGGAACATGAAGAGGAGATGGAGATTCCGGAAACACCCATGCCGGTGCCGGCGAGTTACGACTCACTCGGAAACTCAGCTTCACGGTCAAAACTCTCCGGTGAAGTTGACGGACGGAAAGGTAGCGGTAACGGTAATGGTAACGGTAACGGTGGTGGTTTTTCCTCGACGGTGAAGTATAGAGAATGTCAGAAGAATCATGCCGTCAGCTTCGGTGGCCACGCTGTTGACGGTTGCTGCGAGTTCATTTCCGCCGGTGAAGAAGGAACACTTGAAGCCGTGATTTGCGCTGCTTGTAACTGTCACCGGAACTTCCACCGTAAAGAGATCGACGGAGAGACGGTTAGTTCGTGTCAGCGGCAGCAACCTCCACCGCCGCCGCAACCATATCACCATCACCAGTTTTCACCTTACTACCACCGAGGTCCTCCTTCTACCTCCGGTTACCTCCACCACCACTTAGCAACTCCGGTGGCGCATCACAGACCTTTGGCTCTCCCAGCCACTGCTTCCGGTGGATTCAGCAGAGAAGATGATGATATTTCAAACCCTAGCAGCAGCGGCGGAGGAGGAAACGGTTCCGGTGGATCAAAGAAGAGATTCCGAACAAAATTCACGCAGGAACAGAAAGAGAAGCTCTTGGCTTTTGCGGAAGAACACGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTGTGAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA 804 0.5025 MEFDEPEEHEEEMEIPETPMPVPASYDSLGNSASRSKLSGEVDGRKGSGNGNGNGNGGGFSSTVKYRECQKNHAVSFGGHAVDGCCEFISAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCQRQQPPPPPQPYHHHQFSPYYHRGPPSTSGYLHHHLATPVAHHRPLALPATASGGFSREDDDISNPSSSGGGGNGSGGSKKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCVKRNVLKVWMHNNKNTLGKKP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01281 267 FunFam Zinc-finger homeodomain protein 2 194 265 - -
Vivi7g01281 267 MobiDBLite consensus disorder prediction 119 157 - -
Vivi7g01281 267 MobiDBLite consensus disorder prediction 174 205 - -
Vivi7g01281 267 MobiDBLite consensus disorder prediction 1 59 - -
Vivi7g01281 267 NCBIfam homeobox domain, ZF-HD class 204 261 IPR006455 -
Vivi7g01281 267 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 263 - -
Vivi7g01281 267 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 66 115 IPR006456 -
Vivi7g01281 267 MobiDBLite consensus disorder prediction 182 199 - -
Vivi7g01281 267 Pfam ZF-HD protein dimerisation region 64 116 IPR006456 -
Vivi7g01281 267 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 65 116 IPR006456 -
Vivi7g01281 267 SUPERFAMILY Homeodomain-like 191 265 IPR009057 -
Vivi7g01281 267 Gene3D - 189 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01281 Vivi-Chr7 65648366 65649563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01281 62 263 ZF-HD Transcription Factor Family AT4G24660 53.171 1.35e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Vivi7g01281 ZF-HD_dimer 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01281 - - gmx:100776421 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01281 7 65648366 65649563 Vivi7g01281 7 65648366 65649563 ECH
Vivi7g01281 7 65648366 65649563 Vivi3g02015 3 33489297 33490604 PCT