Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01242 ATGGCTCCCCAAAAATTGTTCCCACCCTCTCCAGCACCACCACCACCACCACCACCTCCCATTTCTCCACCTTCTCCCGCGGCTTCCACTAGCATTGCCCTCATCTCCGGTGTCTTTGCTTCTGGTGTAGTGATCCTTGCAGTCTTGGTAGTTATTTGGATACTACATTATAAGAGAAGAAAGTTGGCAAAGAAACAGAAGGAGTTCCCGGAAAACACTCCAAACACTGCAAATGACTTAGTCCCAACAACATCAACCATAATATCAGGAGGAGAGTATCAGTACATCCTCACTCTCTCTGAAGTGGAAGAAAGCACCAACTATTTCGATGAAGCTCTTGTCATTGGTGTAGGAGGATTCGGCAAAGTATACATGGGAGAGTTGAGGGACGGAAGAAAGGTGGCCGTCAAGAGAGGGAGTAGAACTTCTAGTCAGGGCGTTGAAGAGTTTAAAGCTGAAATCGAAACTCTTTTTAAATTCCGCCATGGGAATTTAGTATCTTTGATTGGTTACTGCGACCAAAATCACGAGTTGATTTTGGTTTACGAGTTCGTTGAAAATGGAACCTTGAAGAGTCATTTGTATGGTTCGGCTCTTCGAAGTTTGTCGTGGAATGAAAGACTGAATATTTGCATTGGAGCTGCAAGAGGACTCCACTATCTCCATACTGCGTATCCTACACCTGTCATTCATCGGGATGTGAAGTCAGTGAACATTTTATTGGATGGAAATCTCAATGCCAAAGTGGGAGATTTTGGAATCTCGAGAACTGGTCCCAATGTCCATGAGACACATGTCAGCACTGGTGTCAAGGGAACGTTTGGATACCTCAATCCCGAGTATTTTATGAGACAGCAGCTTACTGAAAAATCCGATGTTTATTCATTTGGAATAGTCTTATTTGAAATACTCTGTGCAAGGCCTGTGATTGATCCGTCACTTCCTAGTAATGCGATCAATTTGAAAGATTGGGCGATTAATTATATTCAGAAGGGACAGTTGGATCAGATAATTGATCCAAATTTGATTATTGGTGATATCAACCCTGATTCTCTGAAGAGGTTTATGGAAACAGCCGAAAGTTGTGTTGCTGACCGCGGTGTTAATAGACCATCAATGAGAGATGTTTTATGGAATTTGGAGTGTTCTCTTCAATTCCAAGGAGCTGCTCTTCATGGTTCGGCTGCTGAAGATAATTCAGACATGATAGTGGAACTTGCTACACAAGACGCAACAACAGATTTTTCTTTGACAAGAGTGTTCTCTCGGTTGGTAATTTCGGATGAAGGTCCGGAAAGGGGAAGAGGCCTTGGACGTGGTTGTGATGCTGCCGCTCATGGTTCAACTGCGGAAGATAATTCAGACATGATAGTGGAACTTGCTCCACAAAATGCAACGGTTTCCTCTTCTTCCGCTTCTGCAAATATCGAAGACTCACTGATTTTATCTGATGAGGGTCGGGAAAGGGCAAGAGGTCTTGGAAGTGGTCGTGATGATGCGGTTCATGGTTCAGCTGTGGAAGATAATTCAGACATGATAGTGGAACTTGCTCCACCAAATGCAACAGTTTCCGCTTCTTCCGCTTCTGCAAATATCGAAGGCTCACCGATTTTATCTGACGACGGTCAGGAAAGGGGAAGAGGAAGTGGACATGGTCGTGATGCTGGAGATGGAACAATTGATTAG 1686 0.4401 MAPQKLFPPSPAPPPPPPPPISPPSPAASTSIALISGVFASGVVILAVLVVIWILHYKRRKLAKKQKEFPENTPNTANDLVPTTSTIISGGEYQYILTLSEVEESTNYFDEALVIGVGGFGKVYMGELRDGRKVAVKRGSRTSSQGVEEFKAEIETLFKFRHGNLVSLIGYCDQNHELILVYEFVENGTLKSHLYGSALRSLSWNERLNICIGAARGLHYLHTAYPTPVIHRDVKSVNILLDGNLNAKVGDFGISRTGPNVHETHVSTGVKGTFGYLNPEYFMRQQLTEKSDVYSFGIVLFEILCARPVIDPSLPSNAINLKDWAINYIQKGQLDQIIDPNLIIGDINPDSLKRFMETAESCVADRGVNRPSMRDVLWNLECSLQFQGAALHGSAAEDNSDMIVELATQDATTDFSLTRVFSRLVISDEGPERGRGLGRGCDAAAHGSTAEDNSDMIVELAPQNATVSSSSASANIEDSLILSDEGRERARGLGSGRDDAVHGSAVEDNSDMIVELAPPNATVSASSASANIEGSPILSDDGQERGRGSGHGRDAGDGTID 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01242 561 SMART serkin_6 109 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01242 561 Gene3D Transferase(Phosphotransferase) domain 1 185 402 - -
Vivi7g01242 561 PANTHER OS07G0166700 PROTEIN 97 387 IPR045272 GO:0004714|GO:0006468
Vivi7g01242 561 ProSiteProfiles Protein kinase domain profile. 109 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01242 561 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g01242 561 Gene3D Phosphorylase Kinase; domain 1 78 184 - -
Vivi7g01242 561 SUPERFAMILY Protein kinase-like (PK-like) 90 380 IPR011009 -
Vivi7g01242 561 Pfam Protein tyrosine and serine/threonine kinase 114 308 IPR001245 GO:0004672|GO:0006468
Vivi7g01242 561 MobiDBLite consensus disorder prediction 524 561 - -
Vivi7g01242 561 ProSitePatterns Protein kinases ATP-binding region signature. 115 137 IPR017441 GO:0005524
Vivi7g01242 561 FunFam receptor-like protein kinase FERONIA 73 184 - -
Vivi7g01242 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Vivi7g01242 561 CDD STKc_IRAK 115 381 - -
Vivi7g01242 561 FunFam Receptor-like protein kinase FERONIA 185 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01242 Vivi-Chr7 63945875 63953475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01242 31 428 Receptor kinase-like Gene Family AT3G46290 52.693 6.22e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi7g01242 PK_Tyr_Ser-Thr 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01242 - - vvo:131619207 1038.1