Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01235 ATGAGAAGGCTCACATTATTATCCCCGTATCGGCGCCATTTTCTCTCGTCCGTTGCTTCAGAATCTCTAGTTGATAAAGGAGATTCGTTCCGGAAATTCTTCTCCTCTCATCAATCGTTGTTGCTTTCACGAACTTTATTCGGTTGCGGTTTTGTCACTAAAAAAGAGGAATTTCGAAATTCGACATTTCCACTGGGATATCGTTATGGTCAAGCTACAGCGTATTCTTCTACGGCAGAACGGAACTATTATCAGGTGCTTGGTGTTTCTGAAAATGCTAATCAGGATGAGATAAAGAAGGCGTTTCGCTTGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAATAGTCCATCGGCAAAGAGGAAGTTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGACTCTAAAAAGAGGGCAGAGTATGACAAGATGCGTGTTTATGGTTCAGAGAATATGGAATATAGTAACAATCATGATGATGCAGAAAGGTTTAGAAATGCCTACCGTACTCATTTTTCTGATTCATTTCATAATGTATTTTCTGAGATATTTGAAGAAGCAACAACTCAGTTCTCGCAAAATATAGAGGTGGAGTTATCTCTTACTTTCTCAGAAGCCGCAAGAGGATGCACCAAACATGTGTCATTTGATGCGTCAGTTCCCTGTGATTATTGCTATGGGCAAGGATATCCACAAAATGCTACCCCAACAGTTTGTCCAACATGCAGGGGCTTAGGTCGAGTTACAATCCCACCATTTACATCAACATGCATTACTTGTAAAGGAGCTGGCCGCGTTATTAAGGAGTTTTGTTTGTCATGTGGAGGATCCGGGGTTATTGAAGGGATTAAAGAAGTTAAAGTTACTATACCACCAGGCGTTGATTCGGGAGATACCATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGGTGGTCGACATGGAAGTTTATACATAAAAATAAAGGTGGTTGAGGATCCAGTCTTTGAGAGGGATGGTGCAGATATCTATGTGGAATCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGAGGTGCCTACTTTATCAGGGAAGATGCAAATAAACATACCTAAGGGTGTTCAGCCTGGACAGCTGCTAGCATTTAGAGGCAAAGGACTGCCAAAGCATGGGTATTTTGCATTTCATGGGGATCAGTATGTGCGTTTCCGTATAAACTTCCCCATTGCAATCAATGAACGACAACGTGCTATACTTGAAGAATTTGCTATGGAGGAAATAAAGGAGGGAAGTAGTTCAACATTTGAAGGAAATTGGCTTTACCAGCAGCTATCTACTGGTTGA 1341 0.4124 MRRLTLLSPYRRHFLSSVASESLVDKGDSFRKFFSSHQSLLLSRTLFGCGFVTKKEEFRNSTFPLGYRYGQATAYSSTAERNYYQVLGVSENANQDEIKKAFRLLAKKYHPDANKNSPSAKRKFQDIREAYETLRDSKKRAEYDKMRVYGSENMEYSNNHDDAERFRNAYRTHFSDSFHNVFSEIFEEATTQFSQNIEVELSLTFSEAARGCTKHVSFDASVPCDYCYGQGYPQNATPTVCPTCRGLGRVTIPPFTSTCITCKGAGRVIKEFCLSCGGSGVIEGIKEVKVTIPPGVDSGDTIHVPEGGNAAGSGGRHGSLYIKIKVVEDPVFERDGADIYVESNISFTQAILGGKVEVPTLSGKMQINIPKGVQPGQLLAFRGKGLPKHGYFAFHGDQYVRFRINFPIAINERQRAILEEFAMEEIKEGSSSTFEGNWLYQQLSTG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01235 446 Gene3D - 195 325 - -
Vivi7g01235 446 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 45 425 - -
Vivi7g01235 446 Pfam DnaJ domain 82 144 IPR001623 -
Vivi7g01235 446 FunFam Chaperone protein dnaJ 1, mitochondrial 327 433 - -
Vivi7g01235 446 Pfam DnaJ C terminal domain 197 407 IPR002939 -
Vivi7g01235 446 ProSiteProfiles Zinc finger CR-type profile. 211 285 IPR001305 GO:0031072|GO:0051082
Vivi7g01235 446 CDD DnaJ 82 136 IPR001623 -
Vivi7g01235 446 SMART dnaj_3 81 139 IPR001623 -
Vivi7g01235 446 CDD DnaJ_C 195 407 - -
Vivi7g01235 446 ProSiteProfiles dnaJ domain profile. 82 147 IPR001623 -
Vivi7g01235 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 418 IPR008971 GO:0006457|GO:0051082
Vivi7g01235 446 Gene3D - 219 253 - -
Vivi7g01235 446 Gene3D - 254 287 - -
Vivi7g01235 446 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Vivi7g01235 446 Hamap Chaperone protein DnaJ [dnaJ]. 79 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Vivi7g01235 446 Pfam DnaJ central domain 224 280 IPR001305 GO:0031072|GO:0051082
Vivi7g01235 446 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 282 IPR036410 -
Vivi7g01235 446 CDD DnaJ_zf 224 280 IPR001305 GO:0031072|GO:0051082
Vivi7g01235 446 PRINTS DnaJ domain signature 102 117 IPR001623 -
Vivi7g01235 446 PRINTS DnaJ domain signature 139 158 IPR001623 -
Vivi7g01235 446 PRINTS DnaJ domain signature 119 139 IPR001623 -
Vivi7g01235 446 PRINTS DnaJ domain signature 84 102 IPR001623 -
Vivi7g01235 446 Gene3D DnaJ domain 78 194 IPR036869 -
Vivi7g01235 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 195 333 IPR008971 GO:0006457|GO:0051082
Vivi7g01235 446 SUPERFAMILY Chaperone J-domain 78 173 IPR036869 -
Vivi7g01235 446 Gene3D - 327 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01235 Vivi-Chr7 63411272 63425114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01235 76 147 C2H2 Transcription Factor Family AT1G74250 40.260 2.09e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01235 7 63411272 63425114 Vivi7g01235 7 63411272 63425114 ECH