Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01203 ATGAATCAAAACATGGAACGCTACGAGGTTGTCAAGGAAATTGGGTCTGGGAATTTTGCTGTGGCCAAGTTGGTTAGAGATGTTTTCACAAAAGAGCTTTTTGCTGTTAAGTTTATTGAAAGAGGACAAAATATTGATGAACATGTTCAGAGAGAAATCATGAATCATAGATCGTTGAAGCATTCTAATATCATTAGATTCAAAGAGGTTCAGCTAACACCAACACATCTAGCGATAGTAATGGAGTATGCTGCAGGAGGAGAACTCTTTGAGAGGATATGTAGTGCTGGTAGATTTAGTGAAGATGAGGCAAGGTTTTTCTTTCAGCAATTGATATCTGGAGTCAGTTACTGTCATTCAATGCAAATCTGCCATAGAGATTTGAAGCTTGAAAACACACTCTTAGATGGAAGCACCGCGCCACGAGTCAAAATTTGCGACTTTGGTTACTCAAAGTCATCTGTATTGCATTCGCAACCGAAGTCTACAGTAGGAACTCCAGCTTACATTGCACCCGAGGTCCTAACTAAGAAAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGAGTCACTTTATATGTGATGCTAGTTGGCGCGTATCCGTTTGAGGACCCTGAGGATCCCAAAAACTTTAGGAAAACAATCAGTAAGATACTCAGTGTCCAGTACAAAGTTCCTGATTTTGTACGAGTTTCATTGGAATGTATACACCTTCTTTCTCAAATATTCGTCGCTGATCCTGAAAAGAGAATTACGATACCAGAAATCAAAAAGCATCCATGGTTTTTGATGAACTTACCAATAGAATTAATGGAAGGTGGAAGCTGGCAAACCAATGACGTAAATAATCCATCACAAAGTGTTGATGAAGTTCTATCCATCATACAAGAGGCAAGAAAACCTCTTAACATCCCCAAGCTTGGAGGCCTTCTTAGTGGAGATAGTATGGATTTGGATGATTATGATGCCGATATCGAAGATATAGAAACGTTTGGTGATTTTGTCTCCCCTCCTCTTTAA 1026 0.3938 MNQNMERYEVVKEIGSGNFAVAKLVRDVFTKELFAVKFIERGQNIDEHVQREIMNHRSLKHSNIIRFKEVQLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTISKILSVQYKVPDFVRVSLECIHLLSQIFVADPEKRITIPEIKKHPWFLMNLPIELMEGGSWQTNDVNNPSQSVDEVLSIIQEARKPLNIPKLGGLLSGDSMDLDDYDADIEDIETFGDFVSPPL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01203 341 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Vivi7g01203 341 SMART serkin_6 8 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01203 341 FunFam Serine/threonine-protein kinase SRK2E 84 272 - -
Vivi7g01203 341 ProSiteProfiles Protein kinase domain profile. 8 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01203 341 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Vivi7g01203 341 SUPERFAMILY Protein kinase-like (PK-like) 5 272 IPR011009 -
Vivi7g01203 341 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Vivi7g01203 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Vivi7g01203 341 Pfam Protein kinase domain 8 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01203 341 PANTHER SERINE/THREONINE KINASE 5 279 - -
Vivi7g01203 341 CDD STKc_SnRK2 7 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01203 Vivi-Chr7 62499800 62503020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01203 7 272 CBL-interacting serine-threonine protein kinases AT5G25110 42.294 3.50e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vivi7g01203 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01203 K14498 - gmx:100798091 586.26