Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01183 ATGGCACATATTGCTAATGGAAGAGATACTGGAAACTGCGTTTCGCTACTTCGAGTGAATAGTGCAAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGTTGCACAGACACAACAGGATCATTTGTGATATATGCACCTGTGGACATAGTTGCAATGAATGTGGTTCTAAATGGAGGCGATCCTGATTATGTTGCACTTCTTTCATCTGGATTCGCTATATTACCGGACGGAACAACTAATCTTTTCAACTACACTGTAAGCACTTGTAGAATCCAGACCTGA 288 0.4028 MAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLSSGFAILPDGTTNLFNYTVSTCRIQT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01183 95 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 80 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01183 Vivi-Chr7 61924415 61924913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01183 1 82 Homeobox Transcription Factor Family AT1G05230 92.683 1.10e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01183 K09338 - vvo:131617284 191.815