Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01132 ATGGGAAGCTCAAGAGACATTGCAATTGGACCTGTAGCTGTAGTGTCTATGCTGTTATCTTCCTTGGTCACAAAAGTCATAGATCCTGTTGCTAACCCTCATGCCTATAGAGATTTTGTTTTCACTGTCACCTTCTTTACCGGAATTTTTCAAGCCGGATTCGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTCATGGCAGGAGCAGCAATCATTATTGGTCTTCAGCAACTAAAGGGTCTTTTAGGGATCACTCATTTCACCACCAAAACTGATGCAGTTTCAGTGTTGGTTTCTGTTTATAAGTCATTACATCAGCAAATTACTTCTTCTGAAGAAAAATGGAGCCCTATGAATGTTGTCCTCGGATGTTCTTTCTTGATTTTCCTTCTCGTTACTCGCTTCATCGGAAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCGATTGGTCCTCTTCTATCGGTTATACTATCGACTTTAATCGTGTATTTATCGAAAGCTGATAAACAAGGAGTTAATGTGATAAAACATGTCAAAGGAGGATTGAATCAGAGTTCAGTTCATCAGTTACAATTCCATGGTCAAAATGTTGGGCAAGCGGCCAAAATCGGATTAGTCTGTGCAGTTATCGCACTAACAGAAGCGATGGCTGTTGGTCGATCTTTCGCTTCCATCAAGGGATACCAACTTGATGGGAATAGAGAGATGCTATCAATGGGAATCATGAACATTGCTGGATCCTTAACTTCATGCTATGTCGCAACCGGTTCTTTTTCAAGGACAGCGGTTAATTTCAGCGCAGGATGTCAAACAGCGGTATCGAATATTGTGATGGCAGTTACTGTGATTTTGTTCCTGCAATTATTCGCAAGGCTCTTATACTACACACCTATGGCTATCCTTGCTTCTATCATCCTCTCCGCGCTTCCTGGACTAATTGATTTAAACGAGGCTCGCTATATCTGGAAGGTTGACAAGTTAGACTTTCTTGCCTGTATTGGCGCTTTTTTCGGCGTCTTGTTTGCATCCGTAGAGATCGGTCTTCTTGTAGCCGTGACAATCTCATTTGCGAAGATACTAATACAATCGATTCGACCTGGAGTGGAAATTCTAGGACGAGTTCCAAGAACAGAAGCCTTTTGTGATGTTACTCAATATCCGATGGCCATAAGCACGCCAGGCATCGTGGTGATTCGCATAAGTTCCGGCTCACTCTGCTTCGCAAATGCCAATTTTGTCAAAGAAAGAATACTCAAGTGGGTCGTGGAAGAAGACGAGATTCAAGAAGCTGCTAAAGGAAACGTTCGAGCCATAATTATGGACATGACTAACCTGATGAACGTTGATACGTCCGGAATTCTAGCACTCGAGGAATTGCATAAGAGGTTGCATTCGCGCGGCGTAGAATTAGCTATGGTGAATCCAAGGTGGCTAGTAATTCACAAGCTCAAGCTTGCTCACTTTGTGGACAAAATTGGGAAACAATGGGTTTTTCTGACGGTTGGAGAGGCGGTCGACGCGTGTCTGTCATCTAAAATTGCTACTGCTTAA 1578 0.4265 MGSSRDIAIGPVAVVSMLLSSLVTKVIDPVANPHAYRDFVFTVTFFTGIFQAGFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVLVSVYKSLHQQITSSEEKWSPMNVVLGCSFLIFLLVTRFIGRRNKKLFWLPAIGPLLSVILSTLIVYLSKADKQGVNVIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMLSMGIMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVILFLQLFARLLYYTPMAILASIILSALPGLIDLNEARYIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVTISFAKILIQSIRPGVEILGRVPRTEAFCDVTQYPMAISTPGIVVIRISSGSLCFANANFVKERILKWVVEEDEIQEAAKGNVRAIIMDMTNLMNVDTSGILALEELHKRLHSRGVELAMVNPRWLVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLSSKIATA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01132 525 ProSiteProfiles STAS domain profile. 411 517 IPR002645 -
Vivi7g01132 525 Pfam Sulfate permease family 1 342 IPR011547 GO:0016020
Vivi7g01132 525 Pfam STAS domain 395 513 IPR002645 -
Vivi7g01132 525 NCBIfam sulfate permease 1 513 IPR001902 GO:0016020|GO:0055085
Vivi7g01132 525 CDD STAS_SulP_like_sulfate_transporter 395 510 - -
Vivi7g01132 525 SUPERFAMILY SpoIIaa-like 401 517 IPR036513 -
Vivi7g01132 525 PANTHER SULFATE TRANSPORTER 1 518 IPR001902 GO:0016020|GO:0055085
Vivi7g01132 525 Gene3D STAS domain 374 520 IPR036513 -
Vivi7g01132 525 FunFam Sulfate transporter 31 374 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01132 Vivi-Chr7 58405546 58410000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01132 1 522 Inorganic Solute Cotransporters AT5G10180 64.571 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01132 K17469 - gmx:100776591 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01132 7 58405546 58410000 Vivi3g04481 3 80817506 80821818 PCT