Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01111 ATGCGTGCTTCATCAGTTGTGATTGCCGAGCTAGTGTTATGTAGTGCAAGTATCTTTAGTGATCATGACATGATTGACTTTGATTTTGGTTTCACTATTTCTTTTGGTCATATTAGATACGGAGAGCCAGCAGTTGAGGTTGCAAATGAAGGCGTTGGCGCTGCAGGGCATGCAATTGAGTGGAATGAAGAGTTTGTAACTCCTACATGGTTTGGTTACTTATGGTATTGGTTGGCTACACTTTTCTGCAGTATCATACCAGTGTTCAATATGGCAAGACCATTAGCAAAAATATGTGACATCAATGACAGCAAAGAACTTTGGAAAGTTTCTGTTCGTGTGCACCACAAATGGACAGTTGTTTCGAACAAGAGGGAGCATTTTGAGATGATTTTTGTTGATGTATCGGGTGGTGACATACATGTTGTTGTTCCTGCACCGCATGTATCTCTTTTTTCTGAAAAAATGGTCTTGGATCATAGTTACACTGTTTCCAATTTTAAGGTTCAGGCTAATGTTGCGGCTTTCAGACCTTCGTCTCATAAGTTTATGTTGAAGTTTACTGCTGGCACTACGGTTACGGATGATAACAACGCTGAAATACCTCCAAAGCTATTGGTGTTTACTAAATTTACTGATATAATAAACGGCAACTTTAACAAGGATGTGCTAATAGATGTCATTGGTATGGTGGAAAGTATTGGGTATTCACAGACCACATCAGGTGCCCGGAAGCAGCAGATTAACATGATGTTGCGTGACGGGGGTGAGAATACTATCAATTGCACGCTTTGGGAATCCTATGCTGAACAATTCATGAAGTTCAAGCAGGAGCGCGGAGATGATTCTGGTCCTATTTTTGTCATGATTCAATATGCTAAAGTCAAGGAACAGGGTAAGTTTCCACTGTCCGTGACAAACATGTTTAATGTTACCGTCCTTGGTCTGAATACTGATTTACTGCCGATGAAAGAGTTTATAGAAAGTTTTCCGAAGGATTCCATGATTACGTTGTCTGGCCAGGAGGGTTCCAATTCACAGCTTTCAGCACAGAACTCTGAAAATCAACAGATGACTCCTGTACAGAAATTGCTTTCAAAGGCTGTTGTAATGCCTATTGGGGATATTATAAAACTCAGAACTATTACATTTTGTGCGACTGTGGGAGAAACTAAAATGCTGGTTGCCTCTCCGTATGGCTGGTATTATCGTGGTTGTCATGCTTGCTCATGTATTGCGCATGGTGACAGAGCTCCGTTTGAGTGTGAGGCTGGACATTTCACTGAGGCAGAGATTTTTAGGTATAAGATTGAGATTGAGGTTACTCATGCCGGGAATAGCTGTAACTTTCTATTTTGGGACCGAGAGTGTGAGTTACTTTTGGGATTGTCTGCTTCTCAGCTGCGTCATACAATGATTAAGGCTGGCATTCATGATCCCTTGGAATTCCCACTGGCATTGGATCAGATGTTGGATTGCAAGATGGCTTTCAAAGTTAAGTGGCAACCACGTTGGAAGAATGCCTCTGTCGTTATGCTATTGAAGAATGACCCTTTTGTGAAAGAGCTTGCTGATCAGTTTGACCCAGATGAGATGAAACAGCCTGCTGTCGAAGCAATGACCACTGATCTTGATGTGAGTTCAACGCACAGCACAGATCCACTTACTCCTATTGGAAAAAGACACTTTCCAGGCGCATCAAGCGAGTCAACAACCTCGTATGCCACGTGTGATGGAGAACTTTCATCAAACAAGTTAAAGAAAATTATAAAAATAGAGAAGATAGATTAG 1791 0.4149 MRASSVVIAELVLCSASIFSDHDMIDFDFGFTISFGHIRYGEPAVEVANEGVGAAGHAIEWNEEFVTPTWFGYLWYWLATLFCSIIPVFNMARPLAKICDINDSKELWKVSVRVHHKWTVVSNKREHFEMIFVDVSGGDIHVVVPAPHVSLFSEKMVLDHSYTVSNFKVQANVAAFRPSSHKFMLKFTAGTTVTDDNNAEIPPKLLVFTKFTDIINGNFNKDVLIDVIGMVESIGYSQTTSGARKQQINMMLRDGGENTINCTLWESYAEQFMKFKQERGDDSGPIFVMIQYAKVKEQGKFPLSVTNMFNVTVLGLNTDLLPMKEFIESFPKDSMITLSGQEGSNSQLSAQNSENQQMTPVQKLLSKAVVMPIGDIIKLRTITFCATVGETKMLVASPYGWYYRGCHACSCIAHGDRAPFECEAGHFTEAEIFRYKIEIEVTHAGNSCNFLFWDRECELLLGLSASQLRHTMIKAGIHDPLEFPLALDQMLDCKMAFKVKWQPRWKNASVVMLLKNDPFVKELADQFDPDEMKQPAVEAMTTDLDVSSTHSTDPLTPIGKRHFPGASSESTTSYATCDGELSSNKLKKIIKIEKID 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01111 596 SUPERFAMILY Nucleic acid-binding proteins 208 334 IPR012340 -
Vivi7g01111 596 Gene3D - 93 195 IPR012340 -
Vivi7g01111 596 Pfam Domain of unknown function DUF223 129 224 IPR003871 -
Vivi7g01111 596 MobiDBLite consensus disorder prediction 546 572 - -
Vivi7g01111 596 Gene3D - 199 336 IPR012340 -
Vivi7g01111 596 Gene3D - 341 517 IPR012340 -
Vivi7g01111 596 CDD RPA1_DBD_B_like 226 331 - -
Vivi7g01111 596 CDD RPA1_DBD_A_like 109 193 - -
Vivi7g01111 596 SUPERFAMILY Nucleic acid-binding proteins 94 194 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01111 Vivi-Chr7 57504287 57509047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01111 91 468 Core DNA Replication Machinery Family AT5G08020 21.569 7.32e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01111 - - vvo:131628318 977.237