Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01099 ATGTTGAACTCTTCATCATCAACAACTGAACTAGTTGCGGCGAAAAGGATGGATATATATGAGTCATTTCATCAAGTGAACTTGTGGGAAGATAGCTTTAAAGTTGATCATAGCACTTTGAATTCAATTTCTTCACCAATGTTGATGATGAACAATAGTAGCTTAGAGAACAAGTCTGAATGTATTCCTCATGAATCAAGAGAACCTTCCGGAGATGATCAAGACTCTATTGAAGAACCCGTTCCTAAGGTGTTAAGACGACAAGCACAAAATCGGGAGGCTGCTCGAAAATGTCGACTGCGAAAGAAGGCTTATGTTCAACAATTGGAAACAAGTAGATTGAAGCTTATGCAATTGGAACTTGAGATTGAGAAAACAAGAAAACATGGTTTGAACCGAAGCAGCTCATTAGATGTCGGTTATATCGGATCATCCCGAACAATAAATCCAGGGATATCTTTGTTTGAAATAGAATATGGACGATGGATTGAAGAACAAGATAGACGAAACGAAGAACTACGAAATGCTTTGCGAAATAATGAATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATATTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGGTTGATGTGTTCTATTTAATCTCCGGCGCGTGGAAATCGCCGGTAGAACGTCTTTTCCTTTGGATCGGAGGATCTCGGCCGTCACAGATTCTAAATATCGTCGTACCGAAGCTCGAGGCTTTAACAGATCAACAAGTTGGTAGCATTAACAACCTCCGGTTATCTTCTCAACAAGCTGAGGATGCTCTTTCTATGGGGTTAGAGAAGCTTCAGCAGAGTATGATTCATAATATTCAAGCTGATCCTTTGGATTTCGGAAACTATGGTCTTCAAATGGCTTATGCCATGGATAAAGGAGAAGCATTAGAAGGCTTTGTAAACCAGGCAGATCATCTAAGGGAACAAACTCTGCTATACATGTCACGCATACTGACAATTGGGCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTTCATCGTCTTCGCACTCTCAGTTCATTGTGGGCTGCTCGTTCATGTCACCATTTCTACCCTACACAACACTCTAATTGA 1125 0.4053 MLNSSSSTTELVAAKRMDIYESFHQVNLWEDSFKVDHSTLNSISSPMLMMNNSSLENKSECIPHESREPSGDDQDSIEEPVPKVLRRQAQNREAARKCRLRKKAYVQQLETSRLKLMQLELEIEKTRKHGLNRSSSLDVGYIGSSRTINPGISLFEIEYGRWIEEQDRRNEELRNALRNNESDIQLHLLVESSLNQYSNLFRMKAEAAKVDVFYLISGAWKSPVERLFLWIGGSRPSQILNIVVPKLEALTDQQVGSINNLRLSSQQAEDALSMGLEKLQQSMIHNIQADPLDFGNYGLQMAYAMDKGEALEGFVNQADHLREQTLLYMSRILTIGQAAQGLLAMGEYFHRLRTLSSLWAARSCHHFYPTQHSN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01099 374 Pfam bZIP transcription factor 83 112 IPR004827 GO:0003700|GO:0006355
Vivi7g01099 374 MobiDBLite consensus disorder prediction 56 79 - -
Vivi7g01099 374 ProSiteProfiles DOG1 domain profile. 152 362 IPR025422 GO:0006351|GO:0043565
Vivi7g01099 374 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Vivi7g01099 374 Coils Coil 163 183 - -
Vivi7g01099 374 FunFam BZIP family transcription factor 82 131 - -
Vivi7g01099 374 Pfam Seed dormancy control 171 244 IPR025422 GO:0006351|GO:0043565
Vivi7g01099 374 SUPERFAMILY Leucine zipper domain 85 115 IPR046347 GO:0003700|GO:0006355
Vivi7g01099 374 Coils Coil 102 129 - -
Vivi7g01099 374 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Vivi7g01099 374 PANTHER TRANSCRIPTION FACTOR TGA9 7 363 - -
Vivi7g01099 374 Gene3D - 83 137 - -
Vivi7g01099 374 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01099 Vivi-Chr7 57190057 57192697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01099 4 362 Calmodulin-binding Proteins AT1G77920 53.226 1.50e-123 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g01099 DOG1 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01099 K14431 - gmx:100775882 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01099 7 57190057 57192697 Vivi3g04465 3 80368185 80370491 PCT