Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01080 ATGAATCACTTATCTCGAATTTTCGCTTATAGAAAGCAACCAACGGATATGAACTCGAAGAAGAAGACTCCAAGGAAACAACAACCTAAATTAGAACGGCGTAATGCGGCGAAGAACTTCAGCTACGACGCTCAACCGACGTCGCCGGAATCCTCTCCGTCGTCGTCGATTCTCTACACTCGATCCATGGATTTCTACGATCGAACTAGCTTTCGAGTTGAAGGAGTTGATGGTGAGTTCGATATTATTTGTCGGAGCCTCGGGCTTAACGGACCGGAGGATTTCTCGATTCCGGCGGCGGCTTGGGAGGCGATGAAGGTTCGATCGGCGTCTGATGTTTTACCGAGGTTGAATATTTCGGAATTCGATGAAGCCAAGGTGGAGGATGAAATTGTAGTAGCAGAGATTGATGATAGGGTTCCGGTTTCAGTTAGAGATTCTCCTGCTGAGACTAGCGGTTGTTGTAACATAGGTGATGGTGGTGGAAAAGATAGGGTTCCGATTAGGGGTTTTGATGAGGTTAGCACCGGTTGTTATACCGGCGGTGAAAATAGGGTTCCGATTAGGGATGTTGATGAGACGAGCGGTTGTTTGAATACTGGCGGTGGAGGTATTAAAGGATGTAGACCTCCGATGCTTAAGCCGCCACCAGGAGTTAGGGTTTCTATTTTGGATAACACGTGTTCCACGTGGGATCTTCTGAGGGAATTTGCTCCTGAAGGGGAAGGAAAAGGAAAAGAGAGAGAAGAGGAAGAGAAGAAAGATGTAGAAGAAGAAGAAGAAGGGGAAGTGGGTGGTGGAATATTGAAGACAGATGAGGAGGAAAGTGCTGAGATTATTGGTGAGTTTTCGAGGTCGTGTTCCTTCACTACCTTCACTACTTCACAAGAAGATGATTCATCTAGCACTACAACAGAGCCCAGGTCCAATAGTATTTCTCCTAATGTGAGATTGAAACCTGTTATCACTCCTGGTAGCTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTCAAACAAGTTTCACTGCTTGATCAAGGGAGTCATGGAAAGCAAAGTGTCATTCAACTGGAGCGCGAAATTGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCGATACATTGGCACTGAAACGGATGAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCCCTTTTAAGCCTCTACCGGAGGTATAAACTTCGAGATTCCCAAGTATCTGCTTATACGAGACAAATTCTGAGCGGTTTAAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGTCAAGGTTGCGGATTTTGGATTGGCAAAGGCAATTAAATCGAATGATGCTAAATCATGCCAGGGAACAGCATTCTGGATGGCACCAGAGGTTATAAAAGGAAAAGTGAAAGGTTATGGACTTCCAGCTGATGTATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGCATATTCCCTACCATCCTATGGAATTTATCCCTGCAATGTATAGAATTGGAAAAGGTGAACTACCTCCAGTGCCTGATTCTCTTTCAAGAGATGCACGTGATTTCATCCTGCAGTGTCTTAAAGTTAATCCAGATGACCGTCCCACTGCAGCACAACTCTTAGATCACAAATTTGTCCAGAGGTCGTTCTCCCAGTCCTCTGGCTCTGCATCTCCATATACTACGAGAAGAGGTTGA 1800 0.4389 MNHLSRIFAYRKQPTDMNSKKKTPRKQQPKLERRNAAKNFSYDAQPTSPESSPSSSILYTRSMDFYDRTSFRVEGVDGEFDIICRSLGLNGPEDFSIPAAAWEAMKVRSASDVLPRLNISEFDEAKVEDEIVVAEIDDRVPVSVRDSPAETSGCCNIGDGGGKDRVPIRGFDEVSTGCYTGGENRVPIRDVDETSGCLNTGGGGIKGCRPPMLKPPPGVRVSILDNTCSTWDLLREFAPEGEGKGKEREEEEKKDVEEEEEGEVGGGILKTDEEESAEIIGEFSRSCSFTTFTTSQEDDSSSTTTEPRSNSISPNVRLKPVITPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSHGKQSVIQLEREIALLSQFEHENIVRYIGTETDESNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILSGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKSNDAKSCQGTAFWMAPEVIKGKVKGYGLPADVWSLGCTVLEMLTGHIPYHPMEFIPAMYRIGKGELPPVPDSLSRDARDFILQCLKVNPDDRPTAAQLLDHKFVQRSFSQSSGSASPYTTRRG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01080 599 MobiDBLite consensus disorder prediction 238 252 - -
Vivi7g01080 599 SUPERFAMILY Protein kinase-like (PK-like) 305 584 IPR011009 -
Vivi7g01080 599 Pfam Protein kinase domain 328 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01080 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Vivi7g01080 599 Gene3D Transferase(Phosphotransferase) domain 1 325 596 - -
Vivi7g01080 599 MobiDBLite consensus disorder prediction 1 56 - -
Vivi7g01080 599 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Vivi7g01080 599 MobiDBLite consensus disorder prediction 291 315 - -
Vivi7g01080 599 MobiDBLite consensus disorder prediction 15 37 - -
Vivi7g01080 599 ProSiteProfiles Protein kinase domain profile. 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01080 599 MobiDBLite consensus disorder prediction 238 274 - -
Vivi7g01080 599 PRINTS Tyrosine kinase catalytic domain signature 405 418 IPR001245 GO:0004672|GO:0006468
Vivi7g01080 599 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Vivi7g01080 599 PRINTS Tyrosine kinase catalytic domain signature 549 571 IPR001245 GO:0004672|GO:0006468
Vivi7g01080 599 PRINTS Tyrosine kinase catalytic domain signature 440 458 IPR001245 GO:0004672|GO:0006468
Vivi7g01080 599 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 593 - -
Vivi7g01080 599 FunFam Mitogen-activated protein kinase 1, putative, expressed 325 593 - -
Vivi7g01080 599 MobiDBLite consensus disorder prediction 40 56 - -
Vivi7g01080 599 SMART serkin_6 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01080 Vivi-Chr7 56486184 56499875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01080 4 582 MAP Kinase Kinase Kinase AT4G08500 49.595 1.36e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi7g01080 Pkinase 2.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01080 K13414 - gmx:100804388 690.263