Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01054 ATGGATGGAAACCCTAACTCCTCCCAACTTGTCCGCCAATTTCAAGCAGCTCTCAAACGCCCCCGCCCTCCTGGTGGTGGTGCTTTGCAACCCAATGTCATGCGCCCCAAACGTTCTGCTGCTGCTGAAGCAAAGGCAAGGGCGATGAATAATTCTCACGACTCTCAAACCAGCCTCGATCAATCCGAGAATCACTCTATTTCTTTTCGAAAGGGTAGGGATATTGTTGTTGCTGGAGAAGAAATGGAGTGCTTGCCGAGCGGCGTGCCTGAAGCATCAACTGGAATCAACCAAGATTTGAAGCATACAACTTTTCAGCAGGCGGAGCCTGAAAAAAGTTTGATATCCAACGGAGGCAAATTTTCTATGTTGCCAAGGAGAACAATAACTACTCAAGATCATTTACATAAATTCAAAAACTTTTTAAGCCAACCAGCTACACAATCTTCTGTAGTTGGTCCCTCGTGTGCAAGTGCAACAACTACATCAGTCCATTCAAGTTCAGCTCCCATGCTGAATTCTTTAACCGGTTCTTCTCATTCCCATCCAAATAGTGCCTCAAATTTGGTTGTAAAATGCAGTGGGAACCTTAATCCTCATCAAATAACTCACGGGGTTATTAAATCGGAAAATACTTCCCTAAAAGAAACCAATGGAATATCAACCGATCAAGCAACTACTGCAGTCCAGGCTTGTAGTTCACTTACCAATGCTGAATTAACCTTCAAGGAGAGCAACCCACCTAAAGAGCTGCAAAGATGCACTGTAAAGGAAACTAGTATTTCAAATAATGTTTCATGTAATGATGACGCGTTAACTAAAGGAAAAGAGTCTGCAGTTGCTAACAACACACTGCCTGAGGCTCCAACTGTATCTTCAGATGTGAAGTTGGAGTCTTCAAAGTTAGGTAAAACAGATAAAGCTGCTCGGAAAATGACCTACGACCCTGTTTCATTTTTCAAAGTTAGTGGCAAGCTATATCAAAGGCTTGGGAGAATAGGTACAGGAGGAAGTAGTGAGGTACACAAAGTGATTTCATCAGACTGTACAATCTATGCACTTAAAAAGATAAAACTAAAGGGTCGTGATTATGCCACTGCATATGGATTTTGTCAAGAGATTGAGTATCTAAACAGGCTGAAAGGAAAAAGTAATATTATACAGCTTATAAATTATGAGGTGACTGACAAGGCTTTGCTTGAGGGAGTCATGAAAGGCTCTTTCAACAATAAGGGTGGTAAAGTCAAGGATGATGGATTTATATACATGGTACTTGAACATGGGGAAATTGATTTGGCTCATATGTTGTCTCAGAAGTGGAAGGAACTGGATGGCTGCAACCAAACCATAGATGAAAACTGGCTTAGGTTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATCCATGAGGAACGTATTGTGCATTCTGATTTGAAGCCTGCAAATTTCCTCCTTGTCAAAGGTTCCCTCAAATTGATCGATTTTGGTATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAGCGGGATTCACAGGTTGGCACTCTAAACTATATGTCACCAGAAGCATTTATGTGCAACGAGAGTGATGCAAACGGCAACATCATAAAGTGTGGTCGGTCATCCGATATTTGGTCCTTAGGTTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCAGAATACAAGACATTTTGGGCCAAAGTCAAAGTGATAACTGATCCAAAACATCAAATTACATATGAACCAGTTTCAAACCCATGGCTCGTGGATCTTATGAAGAAGTGTCTTGCATGGGATCGGAATGAAAGGTGGAGAATTCCTCAGTTACTCCAACACCCTTTTCTTGCTCCTCCAGTTTCATGTCATCCTTCTTTGTCCCAAGGTCATACCTTTAATTGGCTGCAACTTATTACTGAAACCGGTACATGTGACCAAGAAGCATTGCAGCTTTGTTGTCAACTCCAACAGGTGCTCGGTGACCCCTTTAAGTTGGTAACTCCTGACACTTTAAATTCGCGAGACGGGCAATGCAAGTTACTGTCCCGTATATCAGAACTATGTTTTCAGCTGCAAGAACAATTAGCAAATTCTGATAACAAATAG 2118 0.415 MDGNPNSSQLVRQFQAALKRPRPPGGGALQPNVMRPKRSAAAEAKARAMNNSHDSQTSLDQSENHSISFRKGRDIVVAGEEMECLPSGVPEASTGINQDLKHTTFQQAEPEKSLISNGGKFSMLPRRTITTQDHLHKFKNFLSQPATQSSVVGPSCASATTTSVHSSSAPMLNSLTGSSHSHPNSASNLVVKCSGNLNPHQITHGVIKSENTSLKETNGISTDQATTAVQACSSLTNAELTFKESNPPKELQRCTVKETSISNNVSCNDDALTKGKESAVANNTLPEAPTVSSDVKLESSKLGKTDKAARKMTYDPVSFFKVSGKLYQRLGRIGTGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKSNIIQLINYEVTDKALLEGVMKGSFNNKGGKVKDDGFIYMVLEHGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSEYKTFWAKVKVITDPKHQITYEPVSNPWLVDLMKKCLAWDRNERWRIPQLLQHPFLAPPVSCHPSLSQGHTFNWLQLITETGTCDQEALQLCCQLQQVLGDPFKLVTPDTLNSRDGQCKLLSRISELCFQLQEQLANSDNK 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01054 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Vivi7g01054 705 FunFam Dual specificity protein kinase TTK 320 407 - -
Vivi7g01054 705 FunFam serine/threonine-protein kinase mph1 isoform X1 441 623 - -
Vivi7g01054 705 Pfam Protein kinase domain 327 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01054 705 MobiDBLite consensus disorder prediction 167 187 - -
Vivi7g01054 705 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Vivi7g01054 705 PANTHER MIXED LINEAGE PROTEIN KINASE 50 650 - -
Vivi7g01054 705 ProSiteProfiles Protein kinase domain profile. 327 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01054 705 Gene3D Phosphorylase Kinase; domain 1 320 406 - -
Vivi7g01054 705 SUPERFAMILY Protein kinase-like (PK-like) 318 628 IPR011009 -
Vivi7g01054 705 CDD PKc_Mps1 325 620 IPR027084 -
Vivi7g01054 705 Gene3D Transferase(Phosphotransferase) domain 1 442 625 - -
Vivi7g01054 705 MobiDBLite consensus disorder prediction 1 67 - -
Vivi7g01054 705 MobiDBLite consensus disorder prediction 49 65 - -
Vivi7g01054 705 SMART serkin_6 327 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01054 Vivi-Chr7 55558656 55563123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01054 333 620 MAP Kinase Kinase Kinase AT4G08470 29.492 3.82e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi7g01054 Pkinase 3.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01054 K08866 - gmx:100816674 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01054 7 55558656 55563123 Vivi7g01054 7 55558656 55563123 ECH