Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01053 ATGGATGGAAACCCTAACTCCTCCCAACTTGTCCGCCAATTTCAAGCAGCTCTCAAACGCCCCCGCCCTCCTGGTGGTGGTGCTTTGCAACCCAATGTCATGCGCCCCAAACGTTCTGCTGCTGCTGAAGCAAAGGCAAGGGCGATGAATAATTCTCACGACTCTCAAACCAGCCTCGATCAATCCGAGAATCACTCTATTTCTTTTCGAAAGGGTAGGGATATTGTTGTTGCTGGAGAAGGGGTCAATGATGTTATAGTCAGCGATTTGGAATACATATCATCTCACTTGGGTTCACTTGCATTGACAGAAATGGAGTGCTTGCCGAGCGGCGTGCCTGAAGCATCAACTGGAATCAACCAAGATTTGAAGCATACAACTTTTCAGCAGGCGGAGCCTGAAAAAAGTTTGATATCCAACGGAGGCAAATTTTCTATGTTGCCAAGGAGAACAATAACTACTCAAGATCATTTACATAAATTCAAAAACTTTTTAAGCCAACCAGCTACACAATCTTCTGTAGTTGGTCCCTCGTGTGCAAGTGCAACAACTACATCAGTCCATTCAAGTTCAGCTCCCATGCTGAATTCTTTAACCGGTTCTTCTCATTCCCATCCAAATAGTGCCTCAAATTTGGTTGTAAAATGCAGTGGGAACCTTAATCCTCATCAAATAACTCACGGGGTTATTAAATCGGAAAATACTTCCCTAAAAGAAACCAATGGAATATCAACCGATCAAGCAACTACTGCAGTCCAGGCTTGTAGTTCACTTACCAATGCTGAATTAACCTTCAAGGAGAGCAACCCACCTAAAGAGCTGCAAAGATGCACTGTAAAGGAAACTAGTATTTCAAATAATGTTTCATGTAATGATGACGCGTTAACTAAAGGAAAAGAGTCTGCAGTTGCTAACAACACACTGCCTGAGGCTCCAACTGTATCTTCAGATGTGAAGTTGGAGTCTTCAAAGTTAGGTAAAACAGATAAAGCTGCTCGGAAAATGACCTACGACCCTGTTTCATTTTTCAAAGTTAGTGGCAAGCTATATCAAAGGCTTGGGAGAATAGGTACAGGAGGAAGTAGTGAGGTACACAAAGTGATTTCATCAGACTGTACAATCTATGCACTTAAAAAGATAAAACTAAAGGGTCGTGATTATGCCACTGCATATGGATTTTGTCAAGAGATTGAGTATCTAAACAGGCTGAAAGGAAAAAGTAATATTATACAGCTTATAAATTATGAGGTGACTGACAAGGCTTTGCTTGAGGGAGTCATGAAAGGCTCTTTCAACAATAAGGGTGGTAAAGTCAAGGATGATGGATTTATATACATGGTACTTGAACATGGGGAAATTGATTTGGCTCATATGTTGTCTCAGAAGTGGAAGGAACTGGATGGCTGCAACCAAACCATAGATGAAAACTGGCTTAGGTTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATCCATGAGGAACGTATTGTGCATTCTGATTTGAAGCCTGCAAATTTCCTCCTTGTCAAAGGTTCCCTCAAATTGATCGATTTTGGTATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAGCGGGATTCACAGGTTGGCACTCTAAACTATATGTCACCAGAAGCATTTATGTGCAACGAGAGTGATGCAAACGGCAACATCATAAAGTGTGGTCGGTCATCCGATATTTGGTCCTTAGGTTGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCAGAATACAAGACATTTTGGGCCAAAGTCAAAGTGATAACTGATCCAAAACATCAAATTACATATGAACCAGTTTCAAACCCATGGCTCGTGGATCTTATGAAGAAGTGTCTTGCATGGGATCGGAATGAAAGGTGGAGAATTCCTCAGTTACTCCAACACCCTTTTCTTGCTCCTCCAGTTTCATGTCATCCTTCTTTGTCCCAAGGTCATACCTTTAATTGGCTGCAACTTATTACTGAAACCGGTACATGTGACCAAGAAGCATTGCAGCTTTGTTGTCAACTCCAACAGGTGCTCGGTGACCCCTTTAAGTTGGTAACTCCTGACACTTTAAATTCGCGAGACGGGCAATGCAAGTTACTGTCCCGTATATCAGAACTATGTTTTCAGCTGCAAGAACAATTAGCAAATTCTGATAACAAATAG 2187 0.4147 MDGNPNSSQLVRQFQAALKRPRPPGGGALQPNVMRPKRSAAAEAKARAMNNSHDSQTSLDQSENHSISFRKGRDIVVAGEGVNDVIVSDLEYISSHLGSLALTEMECLPSGVPEASTGINQDLKHTTFQQAEPEKSLISNGGKFSMLPRRTITTQDHLHKFKNFLSQPATQSSVVGPSCASATTTSVHSSSAPMLNSLTGSSHSHPNSASNLVVKCSGNLNPHQITHGVIKSENTSLKETNGISTDQATTAVQACSSLTNAELTFKESNPPKELQRCTVKETSISNNVSCNDDALTKGKESAVANNTLPEAPTVSSDVKLESSKLGKTDKAARKMTYDPVSFFKVSGKLYQRLGRIGTGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKSNIIQLINYEVTDKALLEGVMKGSFNNKGGKVKDDGFIYMVLEHGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRSSDIWSLGCILYQMVYGRTPFSEYKTFWAKVKVITDPKHQITYEPVSNPWLVDLMKKCLAWDRNERWRIPQLLQHPFLAPPVSCHPSLSQGHTFNWLQLITETGTCDQEALQLCCQLQQVLGDPFKLVTPDTLNSRDGQCKLLSRISELCFQLQEQLANSDNK 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01053 728 MobiDBLite consensus disorder prediction 190 209 - -
Vivi7g01053 728 FunFam Dual specificity protein kinase TTK 343 430 - -
Vivi7g01053 728 CDD PKc_Mps1 348 643 IPR027084 -
Vivi7g01053 728 MobiDBLite consensus disorder prediction 1 66 - -
Vivi7g01053 728 SUPERFAMILY Protein kinase-like (PK-like) 341 651 IPR011009 -
Vivi7g01053 728 Gene3D Transferase(Phosphotransferase) domain 1 465 648 - -
Vivi7g01053 728 Gene3D Phosphorylase Kinase; domain 1 343 429 - -
Vivi7g01053 728 ProSiteProfiles Protein kinase domain profile. 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01053 728 SMART serkin_6 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01053 728 Pfam Protein kinase domain 350 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01053 728 FunFam serine/threonine-protein kinase mph1 isoform X1 464 646 - -
Vivi7g01053 728 MobiDBLite consensus disorder prediction 49 65 - -
Vivi7g01053 728 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Vivi7g01053 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Vivi7g01053 728 PANTHER MIXED LINEAGE PROTEIN KINASE 66 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01053 Vivi-Chr7 55558655 55563123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01053 356 643 MAP Kinase Kinase Kinase AT4G08470 29.492 3.98e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi7g01053 Pkinase 3.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01053 K08866 - gmx:100795003 918.302